Gene : Eucgr.B01750 E. grandis v2.0
Defline:  (1 of 10) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  1592
Name:  ? Eucgr.B01750 Secondary Identifier:  ? PAC:32062246
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01750 0.5kb upstream 0.5kb upstream 3068 true Chr02: 38712773-38715840 Eucalyptus grandis
Eucgr.B01750 0.5kb upstream 0.5kb upstream 500 false Chr02: 38715341-38715840 Eucalyptus grandis
Eucgr.B01750 0.5kb downstream 0.5kb downstream 3068 true Chr02: 38712273-38715340 Eucalyptus grandis
Eucgr.B01750 0.5kb downstream 0.5kb downstream 500 false Chr02: 38712273-38712772 Eucalyptus grandis
Eucgr.B01750 1.0kb upstream 1.0kb upstream 3568 true Chr02: 38712773-38716340 Eucalyptus grandis
Eucgr.B01750 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38715341-38716340 Eucalyptus grandis
Eucgr.B01750 1.0kb downstream 1.0kb downstream 3568 true Chr02: 38711773-38715340 Eucalyptus grandis
Eucgr.B01750 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38711773-38712772 Eucalyptus grandis
Eucgr.B01750 2.0kb upstream 2.0kb upstream 4568 true Chr02: 38712773-38717340 Eucalyptus grandis
Eucgr.B01750 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38715341-38717340 Eucalyptus grandis
Eucgr.B01750 2.0kb downstream 2.0kb downstream 4568 true Chr02: 38710773-38715340 Eucalyptus grandis
Eucgr.B01750 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38710773-38712772 Eucalyptus grandis
Eucgr.B01750 5.0kb upstream 5.0kb upstream 7568 true Chr02: 38712773-38720340 Eucalyptus grandis
Eucgr.B01750 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38715341-38720340 Eucalyptus grandis
Eucgr.B01750 5.0kb downstream 5.0kb downstream 7568 true Chr02: 38707773-38715340 Eucalyptus grandis
Eucgr.B01750 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38707773-38712772 Eucalyptus grandis
Eucgr.B01750 10.0kb upstream 10.0kb upstream 12568 true Chr02: 38712773-38725340 Eucalyptus grandis
Eucgr.B01750 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38715341-38725340 Eucalyptus grandis
Eucgr.B01750 10.0kb downstream 10.0kb downstream 12568 true Chr02: 38702773-38715340 Eucalyptus grandis
Eucgr.B01750 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38702773-38712772 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051005 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30853 0.0 3.48978   High
cufflinks 0.406986 0.0 1.23259 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.167436 0.0 0.566833 Low  
cufflinks 0.260671 0.0 0.838337 Low  

0 Strain