Gene : Eucgr.B01762 E. grandis v2.0
Defline:  (1 of 1) KOG3316 - Transport protein particle (TRAPP) complex subunit Genomic Order:  1582
Name:  ? Eucgr.B01762 Secondary Identifier:  ? PAC:32059851
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01762 0.5kb upstream 0.5kb upstream 3910 true Chr02: 38497366-38501275 Eucalyptus grandis
Eucgr.B01762 0.5kb upstream 0.5kb upstream 500 false Chr02: 38500776-38501275 Eucalyptus grandis
Eucgr.B01762 0.5kb downstream 0.5kb downstream 3910 true Chr02: 38496866-38500775 Eucalyptus grandis
Eucgr.B01762 0.5kb downstream 0.5kb downstream 500 false Chr02: 38496866-38497365 Eucalyptus grandis
Eucgr.B01762 1.0kb upstream 1.0kb upstream 4410 true Chr02: 38497366-38501775 Eucalyptus grandis
Eucgr.B01762 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38500776-38501775 Eucalyptus grandis
Eucgr.B01762 1.0kb downstream 1.0kb downstream 4410 true Chr02: 38496366-38500775 Eucalyptus grandis
Eucgr.B01762 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38496366-38497365 Eucalyptus grandis
Eucgr.B01762 2.0kb upstream 2.0kb upstream 5410 true Chr02: 38497366-38502775 Eucalyptus grandis
Eucgr.B01762 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38500776-38502775 Eucalyptus grandis
Eucgr.B01762 2.0kb downstream 2.0kb downstream 5410 true Chr02: 38495366-38500775 Eucalyptus grandis
Eucgr.B01762 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38495366-38497365 Eucalyptus grandis
Eucgr.B01762 5.0kb upstream 5.0kb upstream 8410 true Chr02: 38497366-38505775 Eucalyptus grandis
Eucgr.B01762 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38500776-38505775 Eucalyptus grandis
Eucgr.B01762 5.0kb downstream 5.0kb downstream 8410 true Chr02: 38492366-38500775 Eucalyptus grandis
Eucgr.B01762 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38492366-38497365 Eucalyptus grandis
Eucgr.B01762 10.0kb upstream 10.0kb upstream 13410 true Chr02: 38497366-38510775 Eucalyptus grandis
Eucgr.B01762 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38500776-38510775 Eucalyptus grandis
Eucgr.B01762 10.0kb downstream 10.0kb downstream 13410 true Chr02: 38487366-38500775 Eucalyptus grandis
Eucgr.B01762 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38487366-38497365 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063659 5270 Rosid View MSA
123746706 5271 Pentapetalae View MSA
122792651 5272 Eudicot View MSA
122041714 5273 Angiosperm View MSA
123428891 5275 Viridiplantae View MSA
121346428 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8967 0.0 49.5265    
cufflinks 23.6697 0.0 54.8589    
cufflinks 19.968 0.0 47.2867    
cufflinks 35.7642 0.0 80.6298   High
cufflinks 11.6447 0.0 27.6208   Low
cufflinks 32.0275 0.0 72.8765    

0 Strain