Gene : Eucgr.B01589 E. grandis v2.0
Defline:  (1 of 20) PF03101//PF04434//PF10551 - FAR1 DNA-binding domain (FAR1) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1085
Name:  ? Eucgr.B01589 Secondary Identifier:  ? PAC:32059698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01589 0.5kb upstream 0.5kb upstream 2393 true Chr02: 22032250-22034642 Eucalyptus grandis
Eucgr.B01589 0.5kb upstream 0.5kb upstream 500 false Chr02: 22034143-22034642 Eucalyptus grandis
Eucgr.B01589 0.5kb downstream 0.5kb downstream 2393 true Chr02: 22031750-22034142 Eucalyptus grandis
Eucgr.B01589 0.5kb downstream 0.5kb downstream 500 false Chr02: 22031750-22032249 Eucalyptus grandis
Eucgr.B01589 1.0kb upstream 1.0kb upstream 2893 true Chr02: 22032250-22035142 Eucalyptus grandis
Eucgr.B01589 1.0kb upstream 1.0kb upstream 1000 false Chr02: 22034143-22035142 Eucalyptus grandis
Eucgr.B01589 1.0kb downstream 1.0kb downstream 2893 true Chr02: 22031250-22034142 Eucalyptus grandis
Eucgr.B01589 1.0kb downstream 1.0kb downstream 1000 false Chr02: 22031250-22032249 Eucalyptus grandis
Eucgr.B01589 2.0kb upstream 2.0kb upstream 3893 true Chr02: 22032250-22036142 Eucalyptus grandis
Eucgr.B01589 2.0kb upstream 2.0kb upstream 2000 false Chr02: 22034143-22036142 Eucalyptus grandis
Eucgr.B01589 2.0kb downstream 2.0kb downstream 3893 true Chr02: 22030250-22034142 Eucalyptus grandis
Eucgr.B01589 2.0kb downstream 2.0kb downstream 2000 false Chr02: 22030250-22032249 Eucalyptus grandis
Eucgr.B01589 5.0kb upstream 5.0kb upstream 6893 true Chr02: 22032250-22039142 Eucalyptus grandis
Eucgr.B01589 5.0kb upstream 5.0kb upstream 5000 false Chr02: 22034143-22039142 Eucalyptus grandis
Eucgr.B01589 5.0kb downstream 5.0kb downstream 6893 true Chr02: 22027250-22034142 Eucalyptus grandis
Eucgr.B01589 5.0kb downstream 5.0kb downstream 5000 false Chr02: 22027250-22032249 Eucalyptus grandis
Eucgr.B01589 10.0kb upstream 10.0kb upstream 11893 true Chr02: 22032250-22044142 Eucalyptus grandis
Eucgr.B01589 10.0kb upstream 10.0kb upstream 10000 false Chr02: 22034143-22044142 Eucalyptus grandis
Eucgr.B01589 10.0kb downstream 10.0kb downstream 11893 true Chr02: 22022250-22034142 Eucalyptus grandis
Eucgr.B01589 10.0kb downstream 10.0kb downstream 10000 false Chr02: 22022250-22032249 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051005 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.949126 0.0 2.72732    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.10805 0.0 5.53433    
cufflinks 0.0924183 0.0 0.348207 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain