Gene : Eucgr.B01597 E. grandis v2.0
Defline:  (1 of 5) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  1078
Name:  ? Eucgr.B01597 Secondary Identifier:  ? PAC:32062061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B01597 0.5kb upstream 0.5kb upstream 3330 true Chr02: 21909068-21912397 Eucalyptus grandis
Eucgr.B01597 0.5kb upstream 0.5kb upstream 500 false Chr02: 21909068-21909567 Eucalyptus grandis
Eucgr.B01597 0.5kb downstream 0.5kb downstream 3330 true Chr02: 21909568-21912897 Eucalyptus grandis
Eucgr.B01597 0.5kb downstream 0.5kb downstream 500 false Chr02: 21912398-21912897 Eucalyptus grandis
Eucgr.B01597 1.0kb upstream 1.0kb upstream 3830 true Chr02: 21908568-21912397 Eucalyptus grandis
Eucgr.B01597 1.0kb upstream 1.0kb upstream 1000 false Chr02: 21908568-21909567 Eucalyptus grandis
Eucgr.B01597 1.0kb downstream 1.0kb downstream 3830 true Chr02: 21909568-21913397 Eucalyptus grandis
Eucgr.B01597 1.0kb downstream 1.0kb downstream 1000 false Chr02: 21912398-21913397 Eucalyptus grandis
Eucgr.B01597 2.0kb upstream 2.0kb upstream 4830 true Chr02: 21907568-21912397 Eucalyptus grandis
Eucgr.B01597 2.0kb upstream 2.0kb upstream 2000 false Chr02: 21907568-21909567 Eucalyptus grandis
Eucgr.B01597 2.0kb downstream 2.0kb downstream 4830 true Chr02: 21909568-21914397 Eucalyptus grandis
Eucgr.B01597 2.0kb downstream 2.0kb downstream 2000 false Chr02: 21912398-21914397 Eucalyptus grandis
Eucgr.B01597 5.0kb upstream 5.0kb upstream 7830 true Chr02: 21904568-21912397 Eucalyptus grandis
Eucgr.B01597 5.0kb upstream 5.0kb upstream 5000 false Chr02: 21904568-21909567 Eucalyptus grandis
Eucgr.B01597 5.0kb downstream 5.0kb downstream 7830 true Chr02: 21909568-21917397 Eucalyptus grandis
Eucgr.B01597 5.0kb downstream 5.0kb downstream 5000 false Chr02: 21912398-21917397 Eucalyptus grandis
Eucgr.B01597 10.0kb upstream 10.0kb upstream 12830 true Chr02: 21899568-21912397 Eucalyptus grandis
Eucgr.B01597 10.0kb upstream 10.0kb upstream 10000 false Chr02: 21899568-21909567 Eucalyptus grandis
Eucgr.B01597 10.0kb downstream 10.0kb downstream 12830 true Chr02: 21909568-21922397 Eucalyptus grandis
Eucgr.B01597 10.0kb downstream 10.0kb downstream 10000 false Chr02: 21912398-21922397 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071085 5270 Rosid View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2495 0.0 51.7164    
cufflinks 26.0334 0.0 59.8512    
cufflinks 24.2547 0.0 56.0892    
cufflinks 51.1822 0.0 113.835 High High
cufflinks 51.4334 0.0 114.321 High High
cufflinks 17.3981 0.0 41.2068   Low

0 Strain