Gene : Eucgr.B02437 E. grandis v2.0
Defline:  (1 of 4) PF06232 - Embryo-specific protein 3, (ATS3) (ATS3) Genomic Order:  1940
Name:  ? Eucgr.B02437 Secondary Identifier:  ? PAC:32059785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02437 0.5kb upstream 0.5kb upstream 1425 true Chr02: 43988584-43990008 Eucalyptus grandis
Eucgr.B02437 0.5kb upstream 0.5kb upstream 500 false Chr02: 43989509-43990008 Eucalyptus grandis
Eucgr.B02437 0.5kb downstream 0.5kb downstream 1425 true Chr02: 43988084-43989508 Eucalyptus grandis
Eucgr.B02437 0.5kb downstream 0.5kb downstream 500 false Chr02: 43988084-43988583 Eucalyptus grandis
Eucgr.B02437 1.0kb upstream 1.0kb upstream 1925 true Chr02: 43988584-43990508 Eucalyptus grandis
Eucgr.B02437 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43989509-43990508 Eucalyptus grandis
Eucgr.B02437 1.0kb downstream 1.0kb downstream 1925 true Chr02: 43987584-43989508 Eucalyptus grandis
Eucgr.B02437 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43987584-43988583 Eucalyptus grandis
Eucgr.B02437 2.0kb upstream 2.0kb upstream 2925 true Chr02: 43988584-43991508 Eucalyptus grandis
Eucgr.B02437 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43989509-43991508 Eucalyptus grandis
Eucgr.B02437 2.0kb downstream 2.0kb downstream 2925 true Chr02: 43986584-43989508 Eucalyptus grandis
Eucgr.B02437 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43986584-43988583 Eucalyptus grandis
Eucgr.B02437 5.0kb upstream 5.0kb upstream 5925 true Chr02: 43988584-43994508 Eucalyptus grandis
Eucgr.B02437 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43989509-43994508 Eucalyptus grandis
Eucgr.B02437 5.0kb downstream 5.0kb downstream 5925 true Chr02: 43983584-43989508 Eucalyptus grandis
Eucgr.B02437 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43983584-43988583 Eucalyptus grandis
Eucgr.B02437 10.0kb upstream 10.0kb upstream 10925 true Chr02: 43988584-43999508 Eucalyptus grandis
Eucgr.B02437 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43989509-43999508 Eucalyptus grandis
Eucgr.B02437 10.0kb downstream 10.0kb downstream 10925 true Chr02: 43978584-43989508 Eucalyptus grandis
Eucgr.B02437 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43978584-43988583 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070121 5270 Rosid View MSA
123746143 5271 Pentapetalae View MSA
122796857 5272 Eudicot View MSA
122048426 5273 Angiosperm View MSA
121310965 5274 Embryophyte View MSA
123348331 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.3512 0.0 6.97299    
cufflinks 6.18963 0.0 16.6482    
cufflinks 0.834777 0.0 2.85131   Low
cufflinks 2.48687 0.0 7.42408    
cufflinks 17.6113 0.0 42.8438   High
cufflinks 3.51341 0.0 9.94211    

0 Strain