Gene : Eucgr.B02439 E. grandis v2.0
Defline:  (1 of 3) PTHR11177//PTHR11177:SF186 - CHITINASE Genomic Order:  1942
Name:  ? Eucgr.B02439 Secondary Identifier:  ? PAC:32061813
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6902 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02439 0.5kb upstream 0.5kb upstream 1620 true Chr02: 43996118-43997737 Eucalyptus grandis
Eucgr.B02439 0.5kb upstream 0.5kb upstream 500 false Chr02: 43996118-43996617 Eucalyptus grandis
Eucgr.B02439 0.5kb downstream 0.5kb downstream 1620 true Chr02: 43996618-43998237 Eucalyptus grandis
Eucgr.B02439 0.5kb downstream 0.5kb downstream 500 false Chr02: 43997738-43998237 Eucalyptus grandis
Eucgr.B02439 1.0kb upstream 1.0kb upstream 2120 true Chr02: 43995618-43997737 Eucalyptus grandis
Eucgr.B02439 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43995618-43996617 Eucalyptus grandis
Eucgr.B02439 1.0kb downstream 1.0kb downstream 2120 true Chr02: 43996618-43998737 Eucalyptus grandis
Eucgr.B02439 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43997738-43998737 Eucalyptus grandis
Eucgr.B02439 2.0kb upstream 2.0kb upstream 3120 true Chr02: 43994618-43997737 Eucalyptus grandis
Eucgr.B02439 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43994618-43996617 Eucalyptus grandis
Eucgr.B02439 2.0kb downstream 2.0kb downstream 3120 true Chr02: 43996618-43999737 Eucalyptus grandis
Eucgr.B02439 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43997738-43999737 Eucalyptus grandis
Eucgr.B02439 5.0kb upstream 5.0kb upstream 6120 true Chr02: 43991618-43997737 Eucalyptus grandis
Eucgr.B02439 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43991618-43996617 Eucalyptus grandis
Eucgr.B02439 5.0kb downstream 5.0kb downstream 6120 true Chr02: 43996618-44002737 Eucalyptus grandis
Eucgr.B02439 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43997738-44002737 Eucalyptus grandis
Eucgr.B02439 10.0kb upstream 10.0kb upstream 11120 true Chr02: 43986618-43997737 Eucalyptus grandis
Eucgr.B02439 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43986618-43996617 Eucalyptus grandis
Eucgr.B02439 10.0kb downstream 10.0kb downstream 11120 true Chr02: 43996618-44007737 Eucalyptus grandis
Eucgr.B02439 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43997738-44007737 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072600 5270 Rosid View MSA
123749602 5271 Pentapetalae View MSA
122797171 5272 Eudicot View MSA
122049953 5273 Angiosperm View MSA
121348698 5274 Embryophyte View MSA
123380978 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.08637 0.0 5.92089    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.88706 0.0 17.4718    

0 Strain