Gene : Eucgr.B02348 E. grandis v2.0
Defline:  (1 of 85) PF03514 - GRAS domain family (GRAS) Genomic Order:  1859
Name:  ? Eucgr.B02348 Secondary Identifier:  ? PAC:32059526
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02348 0.5kb upstream 0.5kb upstream 3239 true Chr02: 42416921-42420159 Eucalyptus grandis
Eucgr.B02348 0.5kb upstream 0.5kb upstream 500 false Chr02: 42419660-42420159 Eucalyptus grandis
Eucgr.B02348 0.5kb downstream 0.5kb downstream 3239 true Chr02: 42416421-42419659 Eucalyptus grandis
Eucgr.B02348 0.5kb downstream 0.5kb downstream 500 false Chr02: 42416421-42416920 Eucalyptus grandis
Eucgr.B02348 1.0kb upstream 1.0kb upstream 3739 true Chr02: 42416921-42420659 Eucalyptus grandis
Eucgr.B02348 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42419660-42420659 Eucalyptus grandis
Eucgr.B02348 1.0kb downstream 1.0kb downstream 3739 true Chr02: 42415921-42419659 Eucalyptus grandis
Eucgr.B02348 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42415921-42416920 Eucalyptus grandis
Eucgr.B02348 2.0kb upstream 2.0kb upstream 4739 true Chr02: 42416921-42421659 Eucalyptus grandis
Eucgr.B02348 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42419660-42421659 Eucalyptus grandis
Eucgr.B02348 2.0kb downstream 2.0kb downstream 4739 true Chr02: 42414921-42419659 Eucalyptus grandis
Eucgr.B02348 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42414921-42416920 Eucalyptus grandis
Eucgr.B02348 5.0kb upstream 5.0kb upstream 7739 true Chr02: 42416921-42424659 Eucalyptus grandis
Eucgr.B02348 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42419660-42424659 Eucalyptus grandis
Eucgr.B02348 5.0kb downstream 5.0kb downstream 7739 true Chr02: 42411921-42419659 Eucalyptus grandis
Eucgr.B02348 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42411921-42416920 Eucalyptus grandis
Eucgr.B02348 10.0kb upstream 10.0kb upstream 12739 true Chr02: 42416921-42429659 Eucalyptus grandis
Eucgr.B02348 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42419660-42429659 Eucalyptus grandis
Eucgr.B02348 10.0kb downstream 10.0kb downstream 12739 true Chr02: 42406921-42419659 Eucalyptus grandis
Eucgr.B02348 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42406921-42416920 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.21842 0.0 7.84424    
cufflinks 2.02045 0.0 5.12916    
cufflinks 2.57254 0.0 6.39786    
cufflinks 1.13366 0.0 3.04597    
cufflinks 0.555575 0.0 1.60975 Low Low
cufflinks 3.26676 0.0 7.98463    

0 Strain