Gene : Eucgr.B02349 E. grandis v2.0
Defline:  (1 of 13) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1860
Name:  ? Eucgr.B02349 Secondary Identifier:  ? PAC:32058181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02349 0.5kb upstream 0.5kb upstream 3514 true Chr02: 42421300-42424813 Eucalyptus grandis
Eucgr.B02349 0.5kb upstream 0.5kb upstream 500 false Chr02: 42424314-42424813 Eucalyptus grandis
Eucgr.B02349 0.5kb downstream 0.5kb downstream 3514 true Chr02: 42420800-42424313 Eucalyptus grandis
Eucgr.B02349 0.5kb downstream 0.5kb downstream 500 false Chr02: 42420800-42421299 Eucalyptus grandis
Eucgr.B02349 1.0kb upstream 1.0kb upstream 4014 true Chr02: 42421300-42425313 Eucalyptus grandis
Eucgr.B02349 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42424314-42425313 Eucalyptus grandis
Eucgr.B02349 1.0kb downstream 1.0kb downstream 4014 true Chr02: 42420300-42424313 Eucalyptus grandis
Eucgr.B02349 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42420300-42421299 Eucalyptus grandis
Eucgr.B02349 2.0kb upstream 2.0kb upstream 5014 true Chr02: 42421300-42426313 Eucalyptus grandis
Eucgr.B02349 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42424314-42426313 Eucalyptus grandis
Eucgr.B02349 2.0kb downstream 2.0kb downstream 5014 true Chr02: 42419300-42424313 Eucalyptus grandis
Eucgr.B02349 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42419300-42421299 Eucalyptus grandis
Eucgr.B02349 5.0kb upstream 5.0kb upstream 8014 true Chr02: 42421300-42429313 Eucalyptus grandis
Eucgr.B02349 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42424314-42429313 Eucalyptus grandis
Eucgr.B02349 5.0kb downstream 5.0kb downstream 8014 true Chr02: 42416300-42424313 Eucalyptus grandis
Eucgr.B02349 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42416300-42421299 Eucalyptus grandis
Eucgr.B02349 10.0kb upstream 10.0kb upstream 13014 true Chr02: 42421300-42434313 Eucalyptus grandis
Eucgr.B02349 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42424314-42434313 Eucalyptus grandis
Eucgr.B02349 10.0kb downstream 10.0kb downstream 13014 true Chr02: 42411300-42424313 Eucalyptus grandis
Eucgr.B02349 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42411300-42421299 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.6276 0.0 36.7708    
cufflinks 24.5839 0.0 54.7294   High
cufflinks 21.5773 0.0 47.85    
cufflinks 15.0148 0.0 33.2045    
cufflinks 18.3908 0.0 40.6951    
cufflinks 13.5159 0.0 29.945   Low

0 Strain