Gene : Eucgr.B02345 E. grandis v2.0
Defline:  (1 of 13) PTHR31636:SF54 - SCARECROW-LIKE PROTEIN 14-RELATED Genomic Order:  1856
Name:  ? Eucgr.B02345 Secondary Identifier:  ? PAC:32061224
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02345 0.5kb upstream 0.5kb upstream 3084 true Chr02: 42388590-42391673 Eucalyptus grandis
Eucgr.B02345 0.5kb upstream 0.5kb upstream 500 false Chr02: 42391174-42391673 Eucalyptus grandis
Eucgr.B02345 0.5kb downstream 0.5kb downstream 3084 true Chr02: 42388090-42391173 Eucalyptus grandis
Eucgr.B02345 0.5kb downstream 0.5kb downstream 500 false Chr02: 42388090-42388589 Eucalyptus grandis
Eucgr.B02345 1.0kb upstream 1.0kb upstream 3584 true Chr02: 42388590-42392173 Eucalyptus grandis
Eucgr.B02345 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42391174-42392173 Eucalyptus grandis
Eucgr.B02345 1.0kb downstream 1.0kb downstream 3584 true Chr02: 42387590-42391173 Eucalyptus grandis
Eucgr.B02345 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42387590-42388589 Eucalyptus grandis
Eucgr.B02345 2.0kb upstream 2.0kb upstream 4584 true Chr02: 42388590-42393173 Eucalyptus grandis
Eucgr.B02345 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42391174-42393173 Eucalyptus grandis
Eucgr.B02345 2.0kb downstream 2.0kb downstream 4584 true Chr02: 42386590-42391173 Eucalyptus grandis
Eucgr.B02345 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42386590-42388589 Eucalyptus grandis
Eucgr.B02345 5.0kb upstream 5.0kb upstream 7584 true Chr02: 42388590-42396173 Eucalyptus grandis
Eucgr.B02345 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42391174-42396173 Eucalyptus grandis
Eucgr.B02345 5.0kb downstream 5.0kb downstream 7584 true Chr02: 42383590-42391173 Eucalyptus grandis
Eucgr.B02345 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42383590-42388589 Eucalyptus grandis
Eucgr.B02345 10.0kb upstream 10.0kb upstream 12584 true Chr02: 42388590-42401173 Eucalyptus grandis
Eucgr.B02345 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42391174-42401173 Eucalyptus grandis
Eucgr.B02345 10.0kb downstream 10.0kb downstream 12584 true Chr02: 42378590-42391173 Eucalyptus grandis
Eucgr.B02345 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42378590-42388589 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064639 5270 Rosid View MSA
123750613 5271 Pentapetalae View MSA
122790030 5272 Eudicot View MSA
122048011 5273 Angiosperm View MSA
121350999 5274 Embryophyte View MSA
123381964 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.34767 0.0 21.0844    
cufflinks 3.70937 0.0 8.94457    
cufflinks 7.20428 0.0 16.4811    
cufflinks 5.61307 0.0 13.0343    
cufflinks 1.93882 0.0 5.00648   Low
cufflinks 9.64243 0.0 21.7772    

0 Strain