Gene : Eucgr.B02307 E. grandis v2.0
Defline:  (1 of 1) PTHR23148 - SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN Genomic Order:  1822
Name:  ? Eucgr.B02307 Secondary Identifier:  ? PAC:32062038
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02307 0.5kb upstream 0.5kb upstream 7682 true Chr02: 42025144-42032825 Eucalyptus grandis
Eucgr.B02307 0.5kb upstream 0.5kb upstream 500 false Chr02: 42032326-42032825 Eucalyptus grandis
Eucgr.B02307 0.5kb downstream 0.5kb downstream 7682 true Chr02: 42024644-42032325 Eucalyptus grandis
Eucgr.B02307 0.5kb downstream 0.5kb downstream 500 false Chr02: 42024644-42025143 Eucalyptus grandis
Eucgr.B02307 1.0kb upstream 1.0kb upstream 8182 true Chr02: 42025144-42033325 Eucalyptus grandis
Eucgr.B02307 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42032326-42033325 Eucalyptus grandis
Eucgr.B02307 1.0kb downstream 1.0kb downstream 8182 true Chr02: 42024144-42032325 Eucalyptus grandis
Eucgr.B02307 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42024144-42025143 Eucalyptus grandis
Eucgr.B02307 2.0kb upstream 2.0kb upstream 9182 true Chr02: 42025144-42034325 Eucalyptus grandis
Eucgr.B02307 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42032326-42034325 Eucalyptus grandis
Eucgr.B02307 2.0kb downstream 2.0kb downstream 9182 true Chr02: 42023144-42032325 Eucalyptus grandis
Eucgr.B02307 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42023144-42025143 Eucalyptus grandis
Eucgr.B02307 5.0kb upstream 5.0kb upstream 12182 true Chr02: 42025144-42037325 Eucalyptus grandis
Eucgr.B02307 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42032326-42037325 Eucalyptus grandis
Eucgr.B02307 5.0kb downstream 5.0kb downstream 12182 true Chr02: 42020144-42032325 Eucalyptus grandis
Eucgr.B02307 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42020144-42025143 Eucalyptus grandis
Eucgr.B02307 10.0kb upstream 10.0kb upstream 17182 true Chr02: 42025144-42042325 Eucalyptus grandis
Eucgr.B02307 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42032326-42042325 Eucalyptus grandis
Eucgr.B02307 10.0kb downstream 10.0kb downstream 17182 true Chr02: 42015144-42032325 Eucalyptus grandis
Eucgr.B02307 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42015144-42025143 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062879 5270 Rosid View MSA
123744487 5271 Pentapetalae View MSA
122788944 5272 Eudicot View MSA
122044269 5273 Angiosperm View MSA
121345775 5274 Embryophyte View MSA
123427375 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.7619 0.0 62.2715    
cufflinks 25.0255 0.0 55.9504    
cufflinks 21.2052 0.0 47.1698   Low
cufflinks 28.103 0.0 63.1859    
cufflinks 30.0526 0.0 67.702   High
cufflinks 26.3839 0.0 58.9895    

0 Strain