Gene : Eucgr.B02325 E. grandis v2.0
Defline:  (1 of 3) PTHR23076//PTHR23076:SF69 - METALLOPROTEASE M41 FTSH Genomic Order:  1839
Name:  ? Eucgr.B02325 Secondary Identifier:  ? PAC:32061552
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02325 0.5kb upstream 0.5kb upstream 5839 true Chr02: 42170228-42176066 Eucalyptus grandis
Eucgr.B02325 0.5kb upstream 0.5kb upstream 500 false Chr02: 42170228-42170727 Eucalyptus grandis
Eucgr.B02325 0.5kb downstream 0.5kb downstream 5839 true Chr02: 42170728-42176566 Eucalyptus grandis
Eucgr.B02325 0.5kb downstream 0.5kb downstream 500 false Chr02: 42176067-42176566 Eucalyptus grandis
Eucgr.B02325 1.0kb upstream 1.0kb upstream 6339 true Chr02: 42169728-42176066 Eucalyptus grandis
Eucgr.B02325 1.0kb upstream 1.0kb upstream 1000 false Chr02: 42169728-42170727 Eucalyptus grandis
Eucgr.B02325 1.0kb downstream 1.0kb downstream 6339 true Chr02: 42170728-42177066 Eucalyptus grandis
Eucgr.B02325 1.0kb downstream 1.0kb downstream 1000 false Chr02: 42176067-42177066 Eucalyptus grandis
Eucgr.B02325 2.0kb upstream 2.0kb upstream 7339 true Chr02: 42168728-42176066 Eucalyptus grandis
Eucgr.B02325 2.0kb upstream 2.0kb upstream 2000 false Chr02: 42168728-42170727 Eucalyptus grandis
Eucgr.B02325 2.0kb downstream 2.0kb downstream 7339 true Chr02: 42170728-42178066 Eucalyptus grandis
Eucgr.B02325 2.0kb downstream 2.0kb downstream 2000 false Chr02: 42176067-42178066 Eucalyptus grandis
Eucgr.B02325 5.0kb upstream 5.0kb upstream 10339 true Chr02: 42165728-42176066 Eucalyptus grandis
Eucgr.B02325 5.0kb upstream 5.0kb upstream 5000 false Chr02: 42165728-42170727 Eucalyptus grandis
Eucgr.B02325 5.0kb downstream 5.0kb downstream 10339 true Chr02: 42170728-42181066 Eucalyptus grandis
Eucgr.B02325 5.0kb downstream 5.0kb downstream 5000 false Chr02: 42176067-42181066 Eucalyptus grandis
Eucgr.B02325 10.0kb upstream 10.0kb upstream 15339 true Chr02: 42160728-42176066 Eucalyptus grandis
Eucgr.B02325 10.0kb upstream 10.0kb upstream 10000 false Chr02: 42160728-42170727 Eucalyptus grandis
Eucgr.B02325 10.0kb downstream 10.0kb downstream 15339 true Chr02: 42170728-42186066 Eucalyptus grandis
Eucgr.B02325 10.0kb downstream 10.0kb downstream 10000 false Chr02: 42176067-42186066 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064309 5270 Rosid View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1536 0.0 33.5404    
cufflinks 16.7091 0.0 36.9514    
cufflinks 13.2966 0.0 29.465   Low
cufflinks 17.3702 0.0 38.4163   High
cufflinks 15.726 0.0 34.7872    
cufflinks 12.9783 0.0 28.8069   Low

0 Strain