Gene : Eucgr.B02300 E. grandis v2.0
Defline:  (1 of 2) PTHR11562:SF54 - METAL TOLERANCE PROTEIN B Genomic Order:  1815
Name:  ? Eucgr.B02300 Secondary Identifier:  ? PAC:32061917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02300 0.5kb upstream 0.5kb upstream 1665 true Chr02: 41992541-41994205 Eucalyptus grandis
Eucgr.B02300 0.5kb upstream 0.5kb upstream 500 false Chr02: 41993706-41994205 Eucalyptus grandis
Eucgr.B02300 0.5kb downstream 0.5kb downstream 1665 true Chr02: 41992041-41993705 Eucalyptus grandis
Eucgr.B02300 0.5kb downstream 0.5kb downstream 500 false Chr02: 41992041-41992540 Eucalyptus grandis
Eucgr.B02300 1.0kb upstream 1.0kb upstream 2165 true Chr02: 41992541-41994705 Eucalyptus grandis
Eucgr.B02300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41993706-41994705 Eucalyptus grandis
Eucgr.B02300 1.0kb downstream 1.0kb downstream 2165 true Chr02: 41991541-41993705 Eucalyptus grandis
Eucgr.B02300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41991541-41992540 Eucalyptus grandis
Eucgr.B02300 2.0kb upstream 2.0kb upstream 3165 true Chr02: 41992541-41995705 Eucalyptus grandis
Eucgr.B02300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41993706-41995705 Eucalyptus grandis
Eucgr.B02300 2.0kb downstream 2.0kb downstream 3165 true Chr02: 41990541-41993705 Eucalyptus grandis
Eucgr.B02300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41990541-41992540 Eucalyptus grandis
Eucgr.B02300 5.0kb upstream 5.0kb upstream 6165 true Chr02: 41992541-41998705 Eucalyptus grandis
Eucgr.B02300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41993706-41998705 Eucalyptus grandis
Eucgr.B02300 5.0kb downstream 5.0kb downstream 6165 true Chr02: 41987541-41993705 Eucalyptus grandis
Eucgr.B02300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41987541-41992540 Eucalyptus grandis
Eucgr.B02300 10.0kb upstream 10.0kb upstream 11165 true Chr02: 41992541-42003705 Eucalyptus grandis
Eucgr.B02300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41993706-42003705 Eucalyptus grandis
Eucgr.B02300 10.0kb downstream 10.0kb downstream 11165 true Chr02: 41982541-41993705 Eucalyptus grandis
Eucgr.B02300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41982541-41992540 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791762 5273 Angiosperm View MSA
124061416 5270 Rosid View MSA
123736653 5271 Pentapetalae View MSA
122790600 5272 Eudicot View MSA
121350376 5274 Embryophyte View MSA
123427530 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.67321 0.0 9.83621   High
cufflinks 1.2611 0.0 3.7319    
cufflinks 3.97663 0.0 10.5188   High
cufflinks 2.16189 0.0 6.04505    
cufflinks 0.905988 0.0 2.80227    
cufflinks 0.759403 0.0 2.44229 Low Low

0 Strain