Gene : Eucgr.B02274 E. grandis v2.0
Defline:  (1 of 1) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Genomic Order:  1790
Name:  ? Eucgr.B02274 Secondary Identifier:  ? PAC:32061423
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02274 0.5kb upstream 0.5kb upstream 7097 true Chr02: 41827404-41834500 Eucalyptus grandis
Eucgr.B02274 0.5kb upstream 0.5kb upstream 500 false Chr02: 41834001-41834500 Eucalyptus grandis
Eucgr.B02274 0.5kb downstream 0.5kb downstream 7097 true Chr02: 41826904-41834000 Eucalyptus grandis
Eucgr.B02274 0.5kb downstream 0.5kb downstream 500 false Chr02: 41826904-41827403 Eucalyptus grandis
Eucgr.B02274 1.0kb upstream 1.0kb upstream 7597 true Chr02: 41827404-41835000 Eucalyptus grandis
Eucgr.B02274 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41834001-41835000 Eucalyptus grandis
Eucgr.B02274 1.0kb downstream 1.0kb downstream 7597 true Chr02: 41826404-41834000 Eucalyptus grandis
Eucgr.B02274 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41826404-41827403 Eucalyptus grandis
Eucgr.B02274 2.0kb upstream 2.0kb upstream 8597 true Chr02: 41827404-41836000 Eucalyptus grandis
Eucgr.B02274 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41834001-41836000 Eucalyptus grandis
Eucgr.B02274 2.0kb downstream 2.0kb downstream 8597 true Chr02: 41825404-41834000 Eucalyptus grandis
Eucgr.B02274 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41825404-41827403 Eucalyptus grandis
Eucgr.B02274 5.0kb upstream 5.0kb upstream 11597 true Chr02: 41827404-41839000 Eucalyptus grandis
Eucgr.B02274 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41834001-41839000 Eucalyptus grandis
Eucgr.B02274 5.0kb downstream 5.0kb downstream 11597 true Chr02: 41822404-41834000 Eucalyptus grandis
Eucgr.B02274 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41822404-41827403 Eucalyptus grandis
Eucgr.B02274 10.0kb upstream 10.0kb upstream 16597 true Chr02: 41827404-41844000 Eucalyptus grandis
Eucgr.B02274 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41834001-41844000 Eucalyptus grandis
Eucgr.B02274 10.0kb downstream 10.0kb downstream 16597 true Chr02: 41817404-41834000 Eucalyptus grandis
Eucgr.B02274 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41817404-41827403 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
124063114 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.925 0.0 33.0109    
cufflinks 13.2183 0.0 29.2317    
cufflinks 14.0081 0.0 30.9788    
cufflinks 9.79666 0.0 21.72   Low
cufflinks 13.5366 0.0 29.9358    
cufflinks 22.2445 0.0 49.5096   High

0 Strain