Gene : Eucgr.B02271 E. grandis v2.0
Defline:  (1 of 3) PTHR13073:SF0 - BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 1 Genomic Order:  1787
Name:  ? Eucgr.B02271 Secondary Identifier:  ? PAC:32058667
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02271 0.5kb upstream 0.5kb upstream 2396 true Chr02: 41813771-41816166 Eucalyptus grandis
Eucgr.B02271 0.5kb upstream 0.5kb upstream 500 false Chr02: 41815667-41816166 Eucalyptus grandis
Eucgr.B02271 0.5kb downstream 0.5kb downstream 2396 true Chr02: 41813271-41815666 Eucalyptus grandis
Eucgr.B02271 0.5kb downstream 0.5kb downstream 500 false Chr02: 41813271-41813770 Eucalyptus grandis
Eucgr.B02271 1.0kb upstream 1.0kb upstream 2896 true Chr02: 41813771-41816666 Eucalyptus grandis
Eucgr.B02271 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41815667-41816666 Eucalyptus grandis
Eucgr.B02271 1.0kb downstream 1.0kb downstream 2896 true Chr02: 41812771-41815666 Eucalyptus grandis
Eucgr.B02271 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41812771-41813770 Eucalyptus grandis
Eucgr.B02271 2.0kb upstream 2.0kb upstream 3896 true Chr02: 41813771-41817666 Eucalyptus grandis
Eucgr.B02271 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41815667-41817666 Eucalyptus grandis
Eucgr.B02271 2.0kb downstream 2.0kb downstream 3896 true Chr02: 41811771-41815666 Eucalyptus grandis
Eucgr.B02271 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41811771-41813770 Eucalyptus grandis
Eucgr.B02271 5.0kb upstream 5.0kb upstream 6896 true Chr02: 41813771-41820666 Eucalyptus grandis
Eucgr.B02271 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41815667-41820666 Eucalyptus grandis
Eucgr.B02271 5.0kb downstream 5.0kb downstream 6896 true Chr02: 41808771-41815666 Eucalyptus grandis
Eucgr.B02271 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41808771-41813770 Eucalyptus grandis
Eucgr.B02271 10.0kb upstream 10.0kb upstream 11896 true Chr02: 41813771-41825666 Eucalyptus grandis
Eucgr.B02271 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41815667-41825666 Eucalyptus grandis
Eucgr.B02271 10.0kb downstream 10.0kb downstream 11896 true Chr02: 41803771-41815666 Eucalyptus grandis
Eucgr.B02271 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41803771-41813770 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067786 5270 Rosid View MSA
123736631 5271 Pentapetalae View MSA
122790924 5272 Eudicot View MSA
122042285 5273 Angiosperm View MSA
121346098 5274 Embryophyte View MSA
123425317 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.80737 0.0 6.12217    
cufflinks 0.747775 0.0 2.80921    
cufflinks 8.32614 0.0 21.5371   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain