Gene : Eucgr.B02221 E. grandis v2.0
Defline:  (1 of 1) PTHR33405:SF1 - PROTEIN FLC EXPRESSOR Genomic Order:  1742
Name:  ? Eucgr.B02221 Secondary Identifier:  ? PAC:32061137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02221 0.5kb upstream 0.5kb upstream 4364 true Chr02: 41399358-41403721 Eucalyptus grandis
Eucgr.B02221 0.5kb upstream 0.5kb upstream 500 false Chr02: 41399358-41399857 Eucalyptus grandis
Eucgr.B02221 0.5kb downstream 0.5kb downstream 4364 true Chr02: 41399858-41404221 Eucalyptus grandis
Eucgr.B02221 0.5kb downstream 0.5kb downstream 500 false Chr02: 41403722-41404221 Eucalyptus grandis
Eucgr.B02221 1.0kb upstream 1.0kb upstream 4864 true Chr02: 41398858-41403721 Eucalyptus grandis
Eucgr.B02221 1.0kb upstream 1.0kb upstream 1000 false Chr02: 41398858-41399857 Eucalyptus grandis
Eucgr.B02221 1.0kb downstream 1.0kb downstream 4864 true Chr02: 41399858-41404721 Eucalyptus grandis
Eucgr.B02221 1.0kb downstream 1.0kb downstream 1000 false Chr02: 41403722-41404721 Eucalyptus grandis
Eucgr.B02221 2.0kb upstream 2.0kb upstream 5864 true Chr02: 41397858-41403721 Eucalyptus grandis
Eucgr.B02221 2.0kb upstream 2.0kb upstream 2000 false Chr02: 41397858-41399857 Eucalyptus grandis
Eucgr.B02221 2.0kb downstream 2.0kb downstream 5864 true Chr02: 41399858-41405721 Eucalyptus grandis
Eucgr.B02221 2.0kb downstream 2.0kb downstream 2000 false Chr02: 41403722-41405721 Eucalyptus grandis
Eucgr.B02221 5.0kb upstream 5.0kb upstream 8864 true Chr02: 41394858-41403721 Eucalyptus grandis
Eucgr.B02221 5.0kb upstream 5.0kb upstream 5000 false Chr02: 41394858-41399857 Eucalyptus grandis
Eucgr.B02221 5.0kb downstream 5.0kb downstream 8864 true Chr02: 41399858-41408721 Eucalyptus grandis
Eucgr.B02221 5.0kb downstream 5.0kb downstream 5000 false Chr02: 41403722-41408721 Eucalyptus grandis
Eucgr.B02221 10.0kb upstream 10.0kb upstream 13864 true Chr02: 41389858-41403721 Eucalyptus grandis
Eucgr.B02221 10.0kb upstream 10.0kb upstream 10000 false Chr02: 41389858-41399857 Eucalyptus grandis
Eucgr.B02221 10.0kb downstream 10.0kb downstream 13864 true Chr02: 41399858-41413721 Eucalyptus grandis
Eucgr.B02221 10.0kb downstream 10.0kb downstream 10000 false Chr02: 41403722-41413721 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026776 5273 Angiosperm View MSA
124060836 5270 Rosid View MSA
123743028 5271 Pentapetalae View MSA
122794369 5272 Eudicot View MSA
121296551 5274 Embryophyte View MSA
123334697 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7313 0.0 46.4591   High
cufflinks 12.0065 0.0 27.9651    
cufflinks 17.4598 0.0 39.5702    
cufflinks 13.6216 0.0 31.4086    
cufflinks 14.3193 0.0 32.8539    
cufflinks 11.1668 0.0 25.8988   Low

0 Strain