Gene : Eucgr.B02133 E. grandis v2.0
Defline:  (1 of 1) PTHR31500:SF22 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1665
Name:  ? Eucgr.B02133 Secondary Identifier:  ? PAC:32062031
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02133 0.5kb upstream 0.5kb upstream 5278 true Chr02: 40335814-40341091 Eucalyptus grandis
Eucgr.B02133 0.5kb upstream 0.5kb upstream 500 false Chr02: 40335814-40336313 Eucalyptus grandis
Eucgr.B02133 0.5kb downstream 0.5kb downstream 5278 true Chr02: 40336314-40341591 Eucalyptus grandis
Eucgr.B02133 0.5kb downstream 0.5kb downstream 500 false Chr02: 40341092-40341591 Eucalyptus grandis
Eucgr.B02133 1.0kb upstream 1.0kb upstream 5778 true Chr02: 40335314-40341091 Eucalyptus grandis
Eucgr.B02133 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40335314-40336313 Eucalyptus grandis
Eucgr.B02133 1.0kb downstream 1.0kb downstream 5778 true Chr02: 40336314-40342091 Eucalyptus grandis
Eucgr.B02133 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40341092-40342091 Eucalyptus grandis
Eucgr.B02133 2.0kb upstream 2.0kb upstream 6778 true Chr02: 40334314-40341091 Eucalyptus grandis
Eucgr.B02133 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40334314-40336313 Eucalyptus grandis
Eucgr.B02133 2.0kb downstream 2.0kb downstream 6778 true Chr02: 40336314-40343091 Eucalyptus grandis
Eucgr.B02133 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40341092-40343091 Eucalyptus grandis
Eucgr.B02133 5.0kb upstream 5.0kb upstream 9778 true Chr02: 40331314-40341091 Eucalyptus grandis
Eucgr.B02133 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40331314-40336313 Eucalyptus grandis
Eucgr.B02133 5.0kb downstream 5.0kb downstream 9778 true Chr02: 40336314-40346091 Eucalyptus grandis
Eucgr.B02133 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40341092-40346091 Eucalyptus grandis
Eucgr.B02133 10.0kb upstream 10.0kb upstream 14778 true Chr02: 40326314-40341091 Eucalyptus grandis
Eucgr.B02133 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40326314-40336313 Eucalyptus grandis
Eucgr.B02133 10.0kb downstream 10.0kb downstream 14778 true Chr02: 40336314-40351091 Eucalyptus grandis
Eucgr.B02133 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40341092-40351091 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063425 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1168 0.0 38.9592    
cufflinks 15.1843 0.0 34.814    
cufflinks 18.2163 0.0 41.2922    
cufflinks 5.98818 0.0 14.9235   Low
cufflinks 22.4782 0.0 50.4368    
cufflinks 31.9089 0.0 70.7346   High

0 Strain