Gene : Eucgr.B02108 E. grandis v2.0
Defline:  (1 of 2) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase Genomic Order:  1640
Name:  ? Eucgr.B02108 Secondary Identifier:  ? PAC:32062056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02108 0.5kb upstream 0.5kb upstream 9773 true Chr02: 39935911-39945683 Eucalyptus grandis
Eucgr.B02108 0.5kb upstream 0.5kb upstream 500 false Chr02: 39935911-39936410 Eucalyptus grandis
Eucgr.B02108 0.5kb downstream 0.5kb downstream 9773 true Chr02: 39936411-39946183 Eucalyptus grandis
Eucgr.B02108 0.5kb downstream 0.5kb downstream 500 false Chr02: 39945684-39946183 Eucalyptus grandis
Eucgr.B02108 1.0kb upstream 1.0kb upstream 10273 true Chr02: 39935411-39945683 Eucalyptus grandis
Eucgr.B02108 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39935411-39936410 Eucalyptus grandis
Eucgr.B02108 1.0kb downstream 1.0kb downstream 10273 true Chr02: 39936411-39946683 Eucalyptus grandis
Eucgr.B02108 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39945684-39946683 Eucalyptus grandis
Eucgr.B02108 2.0kb upstream 2.0kb upstream 11273 true Chr02: 39934411-39945683 Eucalyptus grandis
Eucgr.B02108 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39934411-39936410 Eucalyptus grandis
Eucgr.B02108 2.0kb downstream 2.0kb downstream 11273 true Chr02: 39936411-39947683 Eucalyptus grandis
Eucgr.B02108 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39945684-39947683 Eucalyptus grandis
Eucgr.B02108 5.0kb upstream 5.0kb upstream 14273 true Chr02: 39931411-39945683 Eucalyptus grandis
Eucgr.B02108 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39931411-39936410 Eucalyptus grandis
Eucgr.B02108 5.0kb downstream 5.0kb downstream 14273 true Chr02: 39936411-39950683 Eucalyptus grandis
Eucgr.B02108 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39945684-39950683 Eucalyptus grandis
Eucgr.B02108 10.0kb upstream 10.0kb upstream 19273 true Chr02: 39926411-39945683 Eucalyptus grandis
Eucgr.B02108 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39926411-39936410 Eucalyptus grandis
Eucgr.B02108 10.0kb downstream 10.0kb downstream 19273 true Chr02: 39936411-39955683 Eucalyptus grandis
Eucgr.B02108 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39945684-39955683 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041433 5273 Angiosperm View MSA
124065377 5270 Rosid View MSA
123738255 5271 Pentapetalae View MSA
122787643 5272 Eudicot View MSA
121347450 5274 Embryophyte View MSA
123427840 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.74735 0.0 9.18495    
cufflinks 1.66358 0.0 4.3878   Low
cufflinks 2.75462 0.0 6.92517    
cufflinks 3.07364 0.0 7.59275    
cufflinks 3.10759 0.0 7.71373    
cufflinks 4.95899 0.0 11.9075   High

0 Strain