Gene : Eucgr.B02109 E. grandis v2.0
Defline:  (1 of 3) PTHR15371//PTHR15371:SF7 - TIM23 Genomic Order:  1641
Name:  ? Eucgr.B02109 Secondary Identifier:  ? PAC:32061153
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02109 0.5kb upstream 0.5kb upstream 2859 true Chr02: 39946837-39949695 Eucalyptus grandis
Eucgr.B02109 0.5kb upstream 0.5kb upstream 500 false Chr02: 39949196-39949695 Eucalyptus grandis
Eucgr.B02109 0.5kb downstream 0.5kb downstream 2859 true Chr02: 39946337-39949195 Eucalyptus grandis
Eucgr.B02109 0.5kb downstream 0.5kb downstream 500 false Chr02: 39946337-39946836 Eucalyptus grandis
Eucgr.B02109 1.0kb upstream 1.0kb upstream 3359 true Chr02: 39946837-39950195 Eucalyptus grandis
Eucgr.B02109 1.0kb upstream 1.0kb upstream 1000 false Chr02: 39949196-39950195 Eucalyptus grandis
Eucgr.B02109 1.0kb downstream 1.0kb downstream 3359 true Chr02: 39945837-39949195 Eucalyptus grandis
Eucgr.B02109 1.0kb downstream 1.0kb downstream 1000 false Chr02: 39945837-39946836 Eucalyptus grandis
Eucgr.B02109 2.0kb upstream 2.0kb upstream 4359 true Chr02: 39946837-39951195 Eucalyptus grandis
Eucgr.B02109 2.0kb upstream 2.0kb upstream 2000 false Chr02: 39949196-39951195 Eucalyptus grandis
Eucgr.B02109 2.0kb downstream 2.0kb downstream 4359 true Chr02: 39944837-39949195 Eucalyptus grandis
Eucgr.B02109 2.0kb downstream 2.0kb downstream 2000 false Chr02: 39944837-39946836 Eucalyptus grandis
Eucgr.B02109 5.0kb upstream 5.0kb upstream 7359 true Chr02: 39946837-39954195 Eucalyptus grandis
Eucgr.B02109 5.0kb upstream 5.0kb upstream 5000 false Chr02: 39949196-39954195 Eucalyptus grandis
Eucgr.B02109 5.0kb downstream 5.0kb downstream 7359 true Chr02: 39941837-39949195 Eucalyptus grandis
Eucgr.B02109 5.0kb downstream 5.0kb downstream 5000 false Chr02: 39941837-39946836 Eucalyptus grandis
Eucgr.B02109 10.0kb upstream 10.0kb upstream 12359 true Chr02: 39946837-39959195 Eucalyptus grandis
Eucgr.B02109 10.0kb upstream 10.0kb upstream 10000 false Chr02: 39949196-39959195 Eucalyptus grandis
Eucgr.B02109 10.0kb downstream 10.0kb downstream 12359 true Chr02: 39936837-39949195 Eucalyptus grandis
Eucgr.B02109 10.0kb downstream 10.0kb downstream 10000 false Chr02: 39936837-39946836 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069897 5270 Rosid View MSA
123742035 5271 Pentapetalae View MSA
122795290 5272 Eudicot View MSA
122045727 5273 Angiosperm View MSA
121349022 5274 Embryophyte View MSA
123425450 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.95546 0.0 20.8865    
cufflinks 1.2646 0.0 4.12324   Low
cufflinks 6.10453 0.0 16.6934    
cufflinks 10.8308 0.0 28.1165    
cufflinks 9.89777 0.0 25.7282    
cufflinks 8.4921 0.0 22.0342    

0 Strain