Gene : Eucgr.B03048 E. grandis v2.0
Defline:  (1 of 5) PTHR31140:SF3 - AP2/ERF AND B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR RAV2-RELATED Genomic Order:  2374
Name:  ? Eucgr.B03048 Secondary Identifier:  ? PAC:32058608
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03048 0.5kb upstream 0.5kb upstream 1963 true Chr02: 50725766-50727728 Eucalyptus grandis
Eucgr.B03048 0.5kb upstream 0.5kb upstream 500 false Chr02: 50727229-50727728 Eucalyptus grandis
Eucgr.B03048 0.5kb downstream 0.5kb downstream 1963 true Chr02: 50725266-50727228 Eucalyptus grandis
Eucgr.B03048 0.5kb downstream 0.5kb downstream 500 false Chr02: 50725266-50725765 Eucalyptus grandis
Eucgr.B03048 1.0kb upstream 1.0kb upstream 2463 true Chr02: 50725766-50728228 Eucalyptus grandis
Eucgr.B03048 1.0kb upstream 1.0kb upstream 1000 false Chr02: 50727229-50728228 Eucalyptus grandis
Eucgr.B03048 1.0kb downstream 1.0kb downstream 2463 true Chr02: 50724766-50727228 Eucalyptus grandis
Eucgr.B03048 1.0kb downstream 1.0kb downstream 1000 false Chr02: 50724766-50725765 Eucalyptus grandis
Eucgr.B03048 2.0kb upstream 2.0kb upstream 3463 true Chr02: 50725766-50729228 Eucalyptus grandis
Eucgr.B03048 2.0kb upstream 2.0kb upstream 2000 false Chr02: 50727229-50729228 Eucalyptus grandis
Eucgr.B03048 2.0kb downstream 2.0kb downstream 3463 true Chr02: 50723766-50727228 Eucalyptus grandis
Eucgr.B03048 2.0kb downstream 2.0kb downstream 2000 false Chr02: 50723766-50725765 Eucalyptus grandis
Eucgr.B03048 5.0kb upstream 5.0kb upstream 6463 true Chr02: 50725766-50732228 Eucalyptus grandis
Eucgr.B03048 5.0kb upstream 5.0kb upstream 5000 false Chr02: 50727229-50732228 Eucalyptus grandis
Eucgr.B03048 5.0kb downstream 5.0kb downstream 6463 true Chr02: 50720766-50727228 Eucalyptus grandis
Eucgr.B03048 5.0kb downstream 5.0kb downstream 5000 false Chr02: 50720766-50725765 Eucalyptus grandis
Eucgr.B03048 10.0kb upstream 10.0kb upstream 11463 true Chr02: 50725766-50737228 Eucalyptus grandis
Eucgr.B03048 10.0kb upstream 10.0kb upstream 10000 false Chr02: 50727229-50737228 Eucalyptus grandis
Eucgr.B03048 10.0kb downstream 10.0kb downstream 11463 true Chr02: 50715766-50727228 Eucalyptus grandis
Eucgr.B03048 10.0kb downstream 10.0kb downstream 10000 false Chr02: 50715766-50725765 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062734 5270 Rosid View MSA
123743747 5271 Pentapetalae View MSA
122794960 5272 Eudicot View MSA
122047550 5273 Angiosperm View MSA
121310758 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1408 0.0 53.5036    
cufflinks 1.2704 0.0 3.59795   Low
cufflinks 19.4897 0.0 43.455    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.58785 0.0 13.5549    

0 Strain