Gene : Eucgr.B03039 E. grandis v2.0
Defline:  (1 of 7) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  2367
Name:  ? Eucgr.B03039 Secondary Identifier:  ? PAC:32060284
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03039 0.5kb upstream 0.5kb upstream 6837 true Chr02: 50637988-50644824 Eucalyptus grandis
Eucgr.B03039 0.5kb upstream 0.5kb upstream 500 false Chr02: 50637988-50638487 Eucalyptus grandis
Eucgr.B03039 0.5kb downstream 0.5kb downstream 6837 true Chr02: 50638488-50645324 Eucalyptus grandis
Eucgr.B03039 0.5kb downstream 0.5kb downstream 500 false Chr02: 50644825-50645324 Eucalyptus grandis
Eucgr.B03039 1.0kb upstream 1.0kb upstream 7337 true Chr02: 50637488-50644824 Eucalyptus grandis
Eucgr.B03039 1.0kb upstream 1.0kb upstream 1000 false Chr02: 50637488-50638487 Eucalyptus grandis
Eucgr.B03039 1.0kb downstream 1.0kb downstream 7337 true Chr02: 50638488-50645824 Eucalyptus grandis
Eucgr.B03039 1.0kb downstream 1.0kb downstream 1000 false Chr02: 50644825-50645824 Eucalyptus grandis
Eucgr.B03039 2.0kb upstream 2.0kb upstream 8337 true Chr02: 50636488-50644824 Eucalyptus grandis
Eucgr.B03039 2.0kb upstream 2.0kb upstream 2000 false Chr02: 50636488-50638487 Eucalyptus grandis
Eucgr.B03039 2.0kb downstream 2.0kb downstream 8337 true Chr02: 50638488-50646824 Eucalyptus grandis
Eucgr.B03039 2.0kb downstream 2.0kb downstream 2000 false Chr02: 50644825-50646824 Eucalyptus grandis
Eucgr.B03039 5.0kb upstream 5.0kb upstream 11337 true Chr02: 50633488-50644824 Eucalyptus grandis
Eucgr.B03039 5.0kb upstream 5.0kb upstream 5000 false Chr02: 50633488-50638487 Eucalyptus grandis
Eucgr.B03039 5.0kb downstream 5.0kb downstream 11337 true Chr02: 50638488-50649824 Eucalyptus grandis
Eucgr.B03039 5.0kb downstream 5.0kb downstream 5000 false Chr02: 50644825-50649824 Eucalyptus grandis
Eucgr.B03039 10.0kb upstream 10.0kb upstream 16337 true Chr02: 50628488-50644824 Eucalyptus grandis
Eucgr.B03039 10.0kb upstream 10.0kb upstream 10000 false Chr02: 50628488-50638487 Eucalyptus grandis
Eucgr.B03039 10.0kb downstream 10.0kb downstream 16337 true Chr02: 50638488-50654824 Eucalyptus grandis
Eucgr.B03039 10.0kb downstream 10.0kb downstream 10000 false Chr02: 50644825-50654824 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.4373 0.0 79.0538 High  
cufflinks 17.8517 0.0 79.4628   Low
cufflinks 24.7025 0.0 79.9733    
cufflinks 38.8122 0.0 112.591 High  
cufflinks 52.009 0.0 149.864 High High
cufflinks 28.543 0.0 75.2346    

0 Strain