Gene : Eucgr.B03034 E. grandis v2.0
Defline:  (1 of 1) PTHR12385:SF36 - PLASMA-MEMBRANE CHOLINE TRANSPORTER-LIKE PROTEIN Genomic Order:  2362
Name:  ? Eucgr.B03034 Secondary Identifier:  ? PAC:32058913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03034 0.5kb upstream 0.5kb upstream 5511 true Chr02: 50611646-50617156 Eucalyptus grandis
Eucgr.B03034 0.5kb upstream 0.5kb upstream 500 false Chr02: 50616657-50617156 Eucalyptus grandis
Eucgr.B03034 0.5kb downstream 0.5kb downstream 5511 true Chr02: 50611146-50616656 Eucalyptus grandis
Eucgr.B03034 0.5kb downstream 0.5kb downstream 500 false Chr02: 50611146-50611645 Eucalyptus grandis
Eucgr.B03034 1.0kb upstream 1.0kb upstream 6011 true Chr02: 50611646-50617656 Eucalyptus grandis
Eucgr.B03034 1.0kb upstream 1.0kb upstream 1000 false Chr02: 50616657-50617656 Eucalyptus grandis
Eucgr.B03034 1.0kb downstream 1.0kb downstream 6011 true Chr02: 50610646-50616656 Eucalyptus grandis
Eucgr.B03034 1.0kb downstream 1.0kb downstream 1000 false Chr02: 50610646-50611645 Eucalyptus grandis
Eucgr.B03034 2.0kb upstream 2.0kb upstream 7011 true Chr02: 50611646-50618656 Eucalyptus grandis
Eucgr.B03034 2.0kb upstream 2.0kb upstream 2000 false Chr02: 50616657-50618656 Eucalyptus grandis
Eucgr.B03034 2.0kb downstream 2.0kb downstream 7011 true Chr02: 50609646-50616656 Eucalyptus grandis
Eucgr.B03034 2.0kb downstream 2.0kb downstream 2000 false Chr02: 50609646-50611645 Eucalyptus grandis
Eucgr.B03034 5.0kb upstream 5.0kb upstream 10011 true Chr02: 50611646-50621656 Eucalyptus grandis
Eucgr.B03034 5.0kb upstream 5.0kb upstream 5000 false Chr02: 50616657-50621656 Eucalyptus grandis
Eucgr.B03034 5.0kb downstream 5.0kb downstream 10011 true Chr02: 50606646-50616656 Eucalyptus grandis
Eucgr.B03034 5.0kb downstream 5.0kb downstream 5000 false Chr02: 50606646-50611645 Eucalyptus grandis
Eucgr.B03034 10.0kb upstream 10.0kb upstream 15011 true Chr02: 50611646-50626656 Eucalyptus grandis
Eucgr.B03034 10.0kb upstream 10.0kb upstream 10000 false Chr02: 50616657-50626656 Eucalyptus grandis
Eucgr.B03034 10.0kb downstream 10.0kb downstream 15011 true Chr02: 50601646-50616656 Eucalyptus grandis
Eucgr.B03034 10.0kb downstream 10.0kb downstream 10000 false Chr02: 50601646-50611645 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063041 5270 Rosid View MSA
123736673 5271 Pentapetalae View MSA
122792379 5272 Eudicot View MSA
122042832 5273 Angiosperm View MSA
121344178 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.93935 0.0 20.8033    
cufflinks 12.1271 0.0 27.4471    
cufflinks 6.93094 0.0 16.4173   Low
cufflinks 33.8304 0.0 74.9027   High
cufflinks 11.5415 0.0 26.304    
cufflinks 10.3077 0.0 23.8266    

0 Strain