Gene : Eucgr.B02621 E. grandis v2.0
Defline:  (1 of 2) PTHR13861 - VACUOLAR ATP SYNTHASE SUBUNIT F Genomic Order:  2116
Name:  ? Eucgr.B02621 Secondary Identifier:  ? PAC:32060827
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6126 Eucalyptus grandis pathologic  
Egrandis PWY-7219 Eucalyptus grandis pathologic  
Egrandis PWY-7229 Eucalyptus grandis pathologic  
Egrandis PWY-841 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02621 0.5kb upstream 0.5kb upstream 4293 true Chr02: 46114910-46119202 Eucalyptus grandis
Eucgr.B02621 0.5kb upstream 0.5kb upstream 500 false Chr02: 46118703-46119202 Eucalyptus grandis
Eucgr.B02621 0.5kb downstream 0.5kb downstream 4293 true Chr02: 46114410-46118702 Eucalyptus grandis
Eucgr.B02621 0.5kb downstream 0.5kb downstream 500 false Chr02: 46114410-46114909 Eucalyptus grandis
Eucgr.B02621 1.0kb upstream 1.0kb upstream 4793 true Chr02: 46114910-46119702 Eucalyptus grandis
Eucgr.B02621 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46118703-46119702 Eucalyptus grandis
Eucgr.B02621 1.0kb downstream 1.0kb downstream 4793 true Chr02: 46113910-46118702 Eucalyptus grandis
Eucgr.B02621 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46113910-46114909 Eucalyptus grandis
Eucgr.B02621 2.0kb upstream 2.0kb upstream 5793 true Chr02: 46114910-46120702 Eucalyptus grandis
Eucgr.B02621 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46118703-46120702 Eucalyptus grandis
Eucgr.B02621 2.0kb downstream 2.0kb downstream 5793 true Chr02: 46112910-46118702 Eucalyptus grandis
Eucgr.B02621 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46112910-46114909 Eucalyptus grandis
Eucgr.B02621 5.0kb upstream 5.0kb upstream 8793 true Chr02: 46114910-46123702 Eucalyptus grandis
Eucgr.B02621 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46118703-46123702 Eucalyptus grandis
Eucgr.B02621 5.0kb downstream 5.0kb downstream 8793 true Chr02: 46109910-46118702 Eucalyptus grandis
Eucgr.B02621 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46109910-46114909 Eucalyptus grandis
Eucgr.B02621 10.0kb upstream 10.0kb upstream 13793 true Chr02: 46114910-46128702 Eucalyptus grandis
Eucgr.B02621 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46118703-46128702 Eucalyptus grandis
Eucgr.B02621 10.0kb downstream 10.0kb downstream 13793 true Chr02: 46104910-46118702 Eucalyptus grandis
Eucgr.B02621 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46104910-46114909 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062785 5270 Rosid View MSA
123736748 5271 Pentapetalae View MSA
122792211 5272 Eudicot View MSA
122044374 5273 Angiosperm View MSA
121344263 5274 Embryophyte View MSA
123428206 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.3512 0.0 85.746 High  
cufflinks 49.5487 0.0 123.218 High  
cufflinks 30.6469 0.0 82.8303 High  
cufflinks 75.9237 0.0 204.397 High High
cufflinks 44.1302 0.0 113.4 High  
cufflinks 32.2092 0.0 77.7973    

0 Strain