Gene : Eucgr.B02596 E. grandis v2.0
Defline:  (1 of 2) PF10280 - Mediator complex protein (Med11) Genomic Order:  2091
Name:  ? Eucgr.B02596 Secondary Identifier:  ? PAC:32060601
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02596 0.5kb upstream 0.5kb upstream 5005 true Chr02: 45943886-45948890 Eucalyptus grandis
Eucgr.B02596 0.5kb upstream 0.5kb upstream 500 false Chr02: 45943886-45944385 Eucalyptus grandis
Eucgr.B02596 0.5kb downstream 0.5kb downstream 5005 true Chr02: 45944386-45949390 Eucalyptus grandis
Eucgr.B02596 0.5kb downstream 0.5kb downstream 500 false Chr02: 45948891-45949390 Eucalyptus grandis
Eucgr.B02596 1.0kb upstream 1.0kb upstream 5505 true Chr02: 45943386-45948890 Eucalyptus grandis
Eucgr.B02596 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45943386-45944385 Eucalyptus grandis
Eucgr.B02596 1.0kb downstream 1.0kb downstream 5505 true Chr02: 45944386-45949890 Eucalyptus grandis
Eucgr.B02596 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45948891-45949890 Eucalyptus grandis
Eucgr.B02596 2.0kb upstream 2.0kb upstream 6505 true Chr02: 45942386-45948890 Eucalyptus grandis
Eucgr.B02596 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45942386-45944385 Eucalyptus grandis
Eucgr.B02596 2.0kb downstream 2.0kb downstream 6505 true Chr02: 45944386-45950890 Eucalyptus grandis
Eucgr.B02596 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45948891-45950890 Eucalyptus grandis
Eucgr.B02596 5.0kb upstream 5.0kb upstream 9505 true Chr02: 45939386-45948890 Eucalyptus grandis
Eucgr.B02596 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45939386-45944385 Eucalyptus grandis
Eucgr.B02596 5.0kb downstream 5.0kb downstream 9505 true Chr02: 45944386-45953890 Eucalyptus grandis
Eucgr.B02596 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45948891-45953890 Eucalyptus grandis
Eucgr.B02596 10.0kb upstream 10.0kb upstream 14505 true Chr02: 45934386-45948890 Eucalyptus grandis
Eucgr.B02596 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45934386-45944385 Eucalyptus grandis
Eucgr.B02596 10.0kb downstream 10.0kb downstream 14505 true Chr02: 45944386-45958890 Eucalyptus grandis
Eucgr.B02596 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45948891-45958890 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071182 5270 Rosid View MSA
123753036 5271 Pentapetalae View MSA
122786862 5272 Eudicot View MSA
122043453 5273 Angiosperm View MSA
121349058 5274 Embryophyte View MSA
123381143 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7156 0.0 56.2105    
cufflinks 9.05665 0.0 26.5004   Low
cufflinks 15.9467 0.0 45.2611    
cufflinks 23.374 0.0 76.0524    
cufflinks 17.3579 0.0 44.6816    
cufflinks 23.2183 0.0 61.805    

0 Strain