Gene : Eucgr.B02546 E. grandis v2.0
Defline:  (1 of 1) PTHR31907:SF1 - MLP-LIKE PROTEIN 423-RELATED Genomic Order:  2042
Name:  ? Eucgr.B02546 Secondary Identifier:  ? PAC:32061046
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B02546 0.5kb upstream 0.5kb upstream 2192 true Chr02: 45478347-45480538 Eucalyptus grandis
Eucgr.B02546 0.5kb upstream 0.5kb upstream 500 false Chr02: 45480039-45480538 Eucalyptus grandis
Eucgr.B02546 0.5kb downstream 0.5kb downstream 2192 true Chr02: 45477847-45480038 Eucalyptus grandis
Eucgr.B02546 0.5kb downstream 0.5kb downstream 500 false Chr02: 45477847-45478346 Eucalyptus grandis
Eucgr.B02546 1.0kb upstream 1.0kb upstream 2692 true Chr02: 45478347-45481038 Eucalyptus grandis
Eucgr.B02546 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45480039-45481038 Eucalyptus grandis
Eucgr.B02546 1.0kb downstream 1.0kb downstream 2692 true Chr02: 45477347-45480038 Eucalyptus grandis
Eucgr.B02546 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45477347-45478346 Eucalyptus grandis
Eucgr.B02546 2.0kb upstream 2.0kb upstream 3692 true Chr02: 45478347-45482038 Eucalyptus grandis
Eucgr.B02546 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45480039-45482038 Eucalyptus grandis
Eucgr.B02546 2.0kb downstream 2.0kb downstream 3692 true Chr02: 45476347-45480038 Eucalyptus grandis
Eucgr.B02546 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45476347-45478346 Eucalyptus grandis
Eucgr.B02546 5.0kb upstream 5.0kb upstream 6692 true Chr02: 45478347-45485038 Eucalyptus grandis
Eucgr.B02546 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45480039-45485038 Eucalyptus grandis
Eucgr.B02546 5.0kb downstream 5.0kb downstream 6692 true Chr02: 45473347-45480038 Eucalyptus grandis
Eucgr.B02546 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45473347-45478346 Eucalyptus grandis
Eucgr.B02546 10.0kb upstream 10.0kb upstream 11692 true Chr02: 45478347-45490038 Eucalyptus grandis
Eucgr.B02546 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45480039-45490038 Eucalyptus grandis
Eucgr.B02546 10.0kb downstream 10.0kb downstream 11692 true Chr02: 45468347-45480038 Eucalyptus grandis
Eucgr.B02546 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45468347-45478346 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064085 5270 Rosid View MSA
123738083 5271 Pentapetalae View MSA
122796960 5272 Eudicot View MSA
122046763 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 696.146 0.0 2217.56 High  
cufflinks 8.51288 0.0 21.4519    
cufflinks 930.876 0.0 3321.91 High  
cufflinks 23.559 0.0 55.7181    
cufflinks 4.0758 0.0 11.4741   Low
cufflinks 760.421 0.0 2506.41 High  

0 Strain