Gene : Eucgr.B03438 E. grandis v2.0
Defline:  (1 of 1) PTHR10794:SF53 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2541
Name:  ? Eucgr.B03438 Secondary Identifier:  ? PAC:32060616
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03438 0.5kb upstream 0.5kb upstream 4666 true Chr02: 52574890-52579555 Eucalyptus grandis
Eucgr.B03438 0.5kb upstream 0.5kb upstream 500 false Chr02: 52579056-52579555 Eucalyptus grandis
Eucgr.B03438 0.5kb downstream 0.5kb downstream 4666 true Chr02: 52574390-52579055 Eucalyptus grandis
Eucgr.B03438 0.5kb downstream 0.5kb downstream 500 false Chr02: 52574390-52574889 Eucalyptus grandis
Eucgr.B03438 1.0kb upstream 1.0kb upstream 5166 true Chr02: 52574890-52580055 Eucalyptus grandis
Eucgr.B03438 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52579056-52580055 Eucalyptus grandis
Eucgr.B03438 1.0kb downstream 1.0kb downstream 5166 true Chr02: 52573890-52579055 Eucalyptus grandis
Eucgr.B03438 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52573890-52574889 Eucalyptus grandis
Eucgr.B03438 2.0kb upstream 2.0kb upstream 6166 true Chr02: 52574890-52581055 Eucalyptus grandis
Eucgr.B03438 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52579056-52581055 Eucalyptus grandis
Eucgr.B03438 2.0kb downstream 2.0kb downstream 6166 true Chr02: 52572890-52579055 Eucalyptus grandis
Eucgr.B03438 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52572890-52574889 Eucalyptus grandis
Eucgr.B03438 5.0kb upstream 5.0kb upstream 9166 true Chr02: 52574890-52584055 Eucalyptus grandis
Eucgr.B03438 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52579056-52584055 Eucalyptus grandis
Eucgr.B03438 5.0kb downstream 5.0kb downstream 9166 true Chr02: 52569890-52579055 Eucalyptus grandis
Eucgr.B03438 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52569890-52574889 Eucalyptus grandis
Eucgr.B03438 10.0kb upstream 10.0kb upstream 14166 true Chr02: 52574890-52589055 Eucalyptus grandis
Eucgr.B03438 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52579056-52589055 Eucalyptus grandis
Eucgr.B03438 10.0kb downstream 10.0kb downstream 14166 true Chr02: 52564890-52579055 Eucalyptus grandis
Eucgr.B03438 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52564890-52574889 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063785 5270 Rosid View MSA
123740423 5271 Pentapetalae View MSA
122790684 5272 Eudicot View MSA
122042712 5273 Angiosperm View MSA
121349023 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97765 0.0 23.6615   High
cufflinks 2.05449 0.0 5.99469    
cufflinks 5.34737 0.0 13.8707    
cufflinks 1.48861 0.0 4.71347    
cufflinks 1.50972 0.0 4.8324    
cufflinks 12.5 0.0 29.0997   High

0 Strain