Gene : Eucgr.B03363 E. grandis v2.0
Defline:  (1 of 2) PTHR32285:SF57 - PROTEIN ALTERED XYLOGLUCAN 4 Genomic Order:  2610
Name:  ? Eucgr.B03363 Secondary Identifier:  ? PAC:32060426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03363 0.5kb upstream 0.5kb upstream 1988 true Chr02: 53263011-53264998 Eucalyptus grandis
Eucgr.B03363 0.5kb upstream 0.5kb upstream 500 false Chr02: 53263011-53263510 Eucalyptus grandis
Eucgr.B03363 0.5kb downstream 0.5kb downstream 1988 true Chr02: 53263511-53265498 Eucalyptus grandis
Eucgr.B03363 0.5kb downstream 0.5kb downstream 500 false Chr02: 53264999-53265498 Eucalyptus grandis
Eucgr.B03363 1.0kb upstream 1.0kb upstream 2488 true Chr02: 53262511-53264998 Eucalyptus grandis
Eucgr.B03363 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53262511-53263510 Eucalyptus grandis
Eucgr.B03363 1.0kb downstream 1.0kb downstream 2488 true Chr02: 53263511-53265998 Eucalyptus grandis
Eucgr.B03363 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53264999-53265998 Eucalyptus grandis
Eucgr.B03363 2.0kb upstream 2.0kb upstream 3488 true Chr02: 53261511-53264998 Eucalyptus grandis
Eucgr.B03363 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53261511-53263510 Eucalyptus grandis
Eucgr.B03363 2.0kb downstream 2.0kb downstream 3488 true Chr02: 53263511-53266998 Eucalyptus grandis
Eucgr.B03363 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53264999-53266998 Eucalyptus grandis
Eucgr.B03363 5.0kb upstream 5.0kb upstream 6488 true Chr02: 53258511-53264998 Eucalyptus grandis
Eucgr.B03363 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53258511-53263510 Eucalyptus grandis
Eucgr.B03363 5.0kb downstream 5.0kb downstream 6488 true Chr02: 53263511-53269998 Eucalyptus grandis
Eucgr.B03363 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53264999-53269998 Eucalyptus grandis
Eucgr.B03363 10.0kb upstream 10.0kb upstream 11488 true Chr02: 53253511-53264998 Eucalyptus grandis
Eucgr.B03363 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53253511-53263510 Eucalyptus grandis
Eucgr.B03363 10.0kb downstream 10.0kb downstream 11488 true Chr02: 53263511-53274998 Eucalyptus grandis
Eucgr.B03363 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53264999-53274998 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062757 5270 Rosid View MSA
123750797 5271 Pentapetalae View MSA
122786909 5272 Eudicot View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.20413 0.0 3.50106    
cufflinks 1.17436 0.0 3.43421    
cufflinks 2.33601 0.0 6.35647    
cufflinks 5.21886 0.0 13.1007   High
cufflinks 5.71777 0.0 14.2424   High
cufflinks 1.1402 0.0 3.3174    

0 Strain