Gene : Eucgr.B03368 E. grandis v2.0
Defline:  (1 of 1) PTHR11014//PTHR11014:SF85 - PEPTIDASE M20 FAMILY MEMBER Genomic Order:  2605
Name:  ? Eucgr.B03368 Secondary Identifier:  ? PAC:32058835
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03368 0.5kb upstream 0.5kb upstream 3455 true Chr02: 53198658-53202112 Eucalyptus grandis
Eucgr.B03368 0.5kb upstream 0.5kb upstream 500 false Chr02: 53198658-53199157 Eucalyptus grandis
Eucgr.B03368 0.5kb downstream 0.5kb downstream 3455 true Chr02: 53199158-53202612 Eucalyptus grandis
Eucgr.B03368 0.5kb downstream 0.5kb downstream 500 false Chr02: 53202113-53202612 Eucalyptus grandis
Eucgr.B03368 1.0kb upstream 1.0kb upstream 3955 true Chr02: 53198158-53202112 Eucalyptus grandis
Eucgr.B03368 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53198158-53199157 Eucalyptus grandis
Eucgr.B03368 1.0kb downstream 1.0kb downstream 3955 true Chr02: 53199158-53203112 Eucalyptus grandis
Eucgr.B03368 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53202113-53203112 Eucalyptus grandis
Eucgr.B03368 2.0kb upstream 2.0kb upstream 4955 true Chr02: 53197158-53202112 Eucalyptus grandis
Eucgr.B03368 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53197158-53199157 Eucalyptus grandis
Eucgr.B03368 2.0kb downstream 2.0kb downstream 4955 true Chr02: 53199158-53204112 Eucalyptus grandis
Eucgr.B03368 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53202113-53204112 Eucalyptus grandis
Eucgr.B03368 5.0kb upstream 5.0kb upstream 7955 true Chr02: 53194158-53202112 Eucalyptus grandis
Eucgr.B03368 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53194158-53199157 Eucalyptus grandis
Eucgr.B03368 5.0kb downstream 5.0kb downstream 7955 true Chr02: 53199158-53207112 Eucalyptus grandis
Eucgr.B03368 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53202113-53207112 Eucalyptus grandis
Eucgr.B03368 10.0kb upstream 10.0kb upstream 12955 true Chr02: 53189158-53202112 Eucalyptus grandis
Eucgr.B03368 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53189158-53199157 Eucalyptus grandis
Eucgr.B03368 10.0kb downstream 10.0kb downstream 12955 true Chr02: 53199158-53212112 Eucalyptus grandis
Eucgr.B03368 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53202113-53212112 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050601 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.4953 0.0 70.7153    
cufflinks 48.6541 0.0 122.886 High  
cufflinks 60.1337 0.0 151.518 High  
cufflinks 92.0621 0.0 221.934 High High
cufflinks 10.8332 0.0 25.0622    
cufflinks 4.92295 0.0 12.4212   Low

0 Strain