Gene : Eucgr.B03333 E. grandis v2.0
Defline:  (1 of 2) PTHR31458:SF3 - POLYGALACTURONASE NON-CATALYTIC SUBUNIT JP630-RELATED Genomic Order:  2638
Name:  ? Eucgr.B03333 Secondary Identifier:  ? PAC:32059477
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03333 0.5kb upstream 0.5kb upstream 1282 true Chr02: 53530968-53532249 Eucalyptus grandis
Eucgr.B03333 0.5kb upstream 0.5kb upstream 500 false Chr02: 53531750-53532249 Eucalyptus grandis
Eucgr.B03333 0.5kb downstream 0.5kb downstream 1282 true Chr02: 53530468-53531749 Eucalyptus grandis
Eucgr.B03333 0.5kb downstream 0.5kb downstream 500 false Chr02: 53530468-53530967 Eucalyptus grandis
Eucgr.B03333 1.0kb upstream 1.0kb upstream 1782 true Chr02: 53530968-53532749 Eucalyptus grandis
Eucgr.B03333 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53531750-53532749 Eucalyptus grandis
Eucgr.B03333 1.0kb downstream 1.0kb downstream 1782 true Chr02: 53529968-53531749 Eucalyptus grandis
Eucgr.B03333 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53529968-53530967 Eucalyptus grandis
Eucgr.B03333 2.0kb upstream 2.0kb upstream 2782 true Chr02: 53530968-53533749 Eucalyptus grandis
Eucgr.B03333 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53531750-53533749 Eucalyptus grandis
Eucgr.B03333 2.0kb downstream 2.0kb downstream 2782 true Chr02: 53528968-53531749 Eucalyptus grandis
Eucgr.B03333 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53528968-53530967 Eucalyptus grandis
Eucgr.B03333 5.0kb upstream 5.0kb upstream 5782 true Chr02: 53530968-53536749 Eucalyptus grandis
Eucgr.B03333 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53531750-53536749 Eucalyptus grandis
Eucgr.B03333 5.0kb downstream 5.0kb downstream 5782 true Chr02: 53525968-53531749 Eucalyptus grandis
Eucgr.B03333 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53525968-53530967 Eucalyptus grandis
Eucgr.B03333 10.0kb upstream 10.0kb upstream 10782 true Chr02: 53530968-53541749 Eucalyptus grandis
Eucgr.B03333 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53531750-53541749 Eucalyptus grandis
Eucgr.B03333 10.0kb downstream 10.0kb downstream 10782 true Chr02: 53520968-53531749 Eucalyptus grandis
Eucgr.B03333 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53520968-53530967 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124075401 5270 Rosid View MSA
123753290 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.9185 0.0 49.2916    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.9702 0.0 36.5328    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.57948 0.0 14.9814   Low

0 Strain