Gene : Eucgr.B03320 E. grandis v2.0
Defline:  (1 of 1) PTHR11002:SF15 - CARBONIC ANHYDRASE Genomic Order:  2644
Name:  ? Eucgr.B03320 Secondary Identifier:  ? PAC:32059994
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CYANCAT-PWY Eucalyptus grandis pathologic  
Egrandis PWY-241 Eucalyptus grandis pathologic  
Egrandis PWY-7115 Eucalyptus grandis pathologic  
Egrandis PWY-7117 Eucalyptus grandis pathologic  
Egrandis PWYQT-4429 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03320 0.5kb upstream 0.5kb upstream 12683 true Chr02: 53659598-53672280 Eucalyptus grandis
Eucgr.B03320 0.5kb upstream 0.5kb upstream 500 false Chr02: 53671781-53672280 Eucalyptus grandis
Eucgr.B03320 0.5kb downstream 0.5kb downstream 12683 true Chr02: 53659098-53671780 Eucalyptus grandis
Eucgr.B03320 0.5kb downstream 0.5kb downstream 500 false Chr02: 53659098-53659597 Eucalyptus grandis
Eucgr.B03320 1.0kb upstream 1.0kb upstream 13183 true Chr02: 53659598-53672780 Eucalyptus grandis
Eucgr.B03320 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53671781-53672780 Eucalyptus grandis
Eucgr.B03320 1.0kb downstream 1.0kb downstream 13183 true Chr02: 53658598-53671780 Eucalyptus grandis
Eucgr.B03320 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53658598-53659597 Eucalyptus grandis
Eucgr.B03320 2.0kb upstream 2.0kb upstream 14183 true Chr02: 53659598-53673780 Eucalyptus grandis
Eucgr.B03320 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53671781-53673780 Eucalyptus grandis
Eucgr.B03320 2.0kb downstream 2.0kb downstream 14183 true Chr02: 53657598-53671780 Eucalyptus grandis
Eucgr.B03320 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53657598-53659597 Eucalyptus grandis
Eucgr.B03320 5.0kb upstream 5.0kb upstream 17183 true Chr02: 53659598-53676780 Eucalyptus grandis
Eucgr.B03320 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53671781-53676780 Eucalyptus grandis
Eucgr.B03320 5.0kb downstream 5.0kb downstream 17183 true Chr02: 53654598-53671780 Eucalyptus grandis
Eucgr.B03320 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53654598-53659597 Eucalyptus grandis
Eucgr.B03320 10.0kb upstream 10.0kb upstream 22183 true Chr02: 53659598-53681780 Eucalyptus grandis
Eucgr.B03320 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53671781-53681780 Eucalyptus grandis
Eucgr.B03320 10.0kb downstream 10.0kb downstream 22183 true Chr02: 53649598-53671780 Eucalyptus grandis
Eucgr.B03320 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53649598-53659597 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069679 5270 Rosid View MSA
123748034 5271 Pentapetalae View MSA
122785685 5272 Eudicot View MSA
122044024 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.93901 0.0 23.1702   Low
cufflinks 28.9414 0.0 66.3231    
cufflinks 10.2507 0.0 23.7314   Low
cufflinks 37.7755 0.0 87.7296   High
cufflinks 22.7156 0.0 51.0422    
cufflinks 16.8609 0.0 37.9289    

0 Strain