Gene : Eucgr.B03287 E. grandis v2.0
Defline:  (1 of 1) PTHR10994:SF83 - NUCLEOTIDE-DIPHOSPHO-SUGAR TRANSFERASE FAMILY PROTEIN Genomic Order:  2679
Name:  ? Eucgr.B03287 Secondary Identifier:  ? PAC:32058429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03287 0.5kb upstream 0.5kb upstream 3743 true Chr02: 53973648-53977390 Eucalyptus grandis
Eucgr.B03287 0.5kb upstream 0.5kb upstream 500 false Chr02: 53973648-53974147 Eucalyptus grandis
Eucgr.B03287 0.5kb downstream 0.5kb downstream 3743 true Chr02: 53974148-53977890 Eucalyptus grandis
Eucgr.B03287 0.5kb downstream 0.5kb downstream 500 false Chr02: 53977391-53977890 Eucalyptus grandis
Eucgr.B03287 1.0kb upstream 1.0kb upstream 4243 true Chr02: 53973148-53977390 Eucalyptus grandis
Eucgr.B03287 1.0kb upstream 1.0kb upstream 1000 false Chr02: 53973148-53974147 Eucalyptus grandis
Eucgr.B03287 1.0kb downstream 1.0kb downstream 4243 true Chr02: 53974148-53978390 Eucalyptus grandis
Eucgr.B03287 1.0kb downstream 1.0kb downstream 1000 false Chr02: 53977391-53978390 Eucalyptus grandis
Eucgr.B03287 2.0kb upstream 2.0kb upstream 5243 true Chr02: 53972148-53977390 Eucalyptus grandis
Eucgr.B03287 2.0kb upstream 2.0kb upstream 2000 false Chr02: 53972148-53974147 Eucalyptus grandis
Eucgr.B03287 2.0kb downstream 2.0kb downstream 5243 true Chr02: 53974148-53979390 Eucalyptus grandis
Eucgr.B03287 2.0kb downstream 2.0kb downstream 2000 false Chr02: 53977391-53979390 Eucalyptus grandis
Eucgr.B03287 5.0kb upstream 5.0kb upstream 8243 true Chr02: 53969148-53977390 Eucalyptus grandis
Eucgr.B03287 5.0kb upstream 5.0kb upstream 5000 false Chr02: 53969148-53974147 Eucalyptus grandis
Eucgr.B03287 5.0kb downstream 5.0kb downstream 8243 true Chr02: 53974148-53982390 Eucalyptus grandis
Eucgr.B03287 5.0kb downstream 5.0kb downstream 5000 false Chr02: 53977391-53982390 Eucalyptus grandis
Eucgr.B03287 10.0kb upstream 10.0kb upstream 13243 true Chr02: 53964148-53977390 Eucalyptus grandis
Eucgr.B03287 10.0kb upstream 10.0kb upstream 10000 false Chr02: 53964148-53974147 Eucalyptus grandis
Eucgr.B03287 10.0kb downstream 10.0kb downstream 13243 true Chr02: 53974148-53987390 Eucalyptus grandis
Eucgr.B03287 10.0kb downstream 10.0kb downstream 10000 false Chr02: 53977391-53987390 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068968 5270 Rosid View MSA
123739201 5271 Pentapetalae View MSA
122787123 5272 Eudicot View MSA
122044256 5273 Angiosperm View MSA
121346549 5274 Embryophyte View MSA
123428119 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.585748 0.0 1.77399    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.504799 0.0 1.5516    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.88709 0.0 5.07167   High

0 Strain