Gene : Eucgr.B03215 E. grandis v2.0
Defline:  (1 of 1) PTHR12899:SF8 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  2526
Name:  ? Eucgr.B03215 Secondary Identifier:  ? PAC:32059135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03215 0.5kb upstream 0.5kb upstream 2830 true Chr02: 52402691-52405520 Eucalyptus grandis
Eucgr.B03215 0.5kb upstream 0.5kb upstream 500 false Chr02: 52405021-52405520 Eucalyptus grandis
Eucgr.B03215 0.5kb downstream 0.5kb downstream 2830 true Chr02: 52402191-52405020 Eucalyptus grandis
Eucgr.B03215 0.5kb downstream 0.5kb downstream 500 false Chr02: 52402191-52402690 Eucalyptus grandis
Eucgr.B03215 1.0kb upstream 1.0kb upstream 3330 true Chr02: 52402691-52406020 Eucalyptus grandis
Eucgr.B03215 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52405021-52406020 Eucalyptus grandis
Eucgr.B03215 1.0kb downstream 1.0kb downstream 3330 true Chr02: 52401691-52405020 Eucalyptus grandis
Eucgr.B03215 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52401691-52402690 Eucalyptus grandis
Eucgr.B03215 2.0kb upstream 2.0kb upstream 4330 true Chr02: 52402691-52407020 Eucalyptus grandis
Eucgr.B03215 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52405021-52407020 Eucalyptus grandis
Eucgr.B03215 2.0kb downstream 2.0kb downstream 4330 true Chr02: 52400691-52405020 Eucalyptus grandis
Eucgr.B03215 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52400691-52402690 Eucalyptus grandis
Eucgr.B03215 5.0kb upstream 5.0kb upstream 7330 true Chr02: 52402691-52410020 Eucalyptus grandis
Eucgr.B03215 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52405021-52410020 Eucalyptus grandis
Eucgr.B03215 5.0kb downstream 5.0kb downstream 7330 true Chr02: 52397691-52405020 Eucalyptus grandis
Eucgr.B03215 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52397691-52402690 Eucalyptus grandis
Eucgr.B03215 10.0kb upstream 10.0kb upstream 12330 true Chr02: 52402691-52415020 Eucalyptus grandis
Eucgr.B03215 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52405021-52415020 Eucalyptus grandis
Eucgr.B03215 10.0kb downstream 10.0kb downstream 12330 true Chr02: 52392691-52405020 Eucalyptus grandis
Eucgr.B03215 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52392691-52402690 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068538 5270 Rosid View MSA
123741435 5271 Pentapetalae View MSA
122786788 5272 Eudicot View MSA
122046996 5273 Angiosperm View MSA
121350781 5274 Embryophyte View MSA
123423914 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.6678 0.0 16.216    
cufflinks 3.99562 0.0 11.0299    
cufflinks 3.08621 0.0 10.3008   Low
cufflinks 3.4056 0.0 9.5176    
cufflinks 5.8002 0.0 18.4301    
cufflinks 9.59115 0.0 27.2954   High

0 Strain