Gene : Eucgr.B03166 E. grandis v2.0
Defline:  (1 of 1) PTHR11468//PTHR11468:SF14 - GLYCOGEN PHOSPHORYLASE Genomic Order:  2478
Name:  ? Eucgr.B03166 Secondary Identifier:  ? PAC:32062210
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-7238 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03166 0.5kb upstream 0.5kb upstream 9176 true Chr02: 52094272-52103447 Eucalyptus grandis
Eucgr.B03166 0.5kb upstream 0.5kb upstream 500 false Chr02: 52102948-52103447 Eucalyptus grandis
Eucgr.B03166 0.5kb downstream 0.5kb downstream 9176 true Chr02: 52093772-52102947 Eucalyptus grandis
Eucgr.B03166 0.5kb downstream 0.5kb downstream 500 false Chr02: 52093772-52094271 Eucalyptus grandis
Eucgr.B03166 1.0kb upstream 1.0kb upstream 9676 true Chr02: 52094272-52103947 Eucalyptus grandis
Eucgr.B03166 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52102948-52103947 Eucalyptus grandis
Eucgr.B03166 1.0kb downstream 1.0kb downstream 9676 true Chr02: 52093272-52102947 Eucalyptus grandis
Eucgr.B03166 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52093272-52094271 Eucalyptus grandis
Eucgr.B03166 2.0kb upstream 2.0kb upstream 10676 true Chr02: 52094272-52104947 Eucalyptus grandis
Eucgr.B03166 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52102948-52104947 Eucalyptus grandis
Eucgr.B03166 2.0kb downstream 2.0kb downstream 10676 true Chr02: 52092272-52102947 Eucalyptus grandis
Eucgr.B03166 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52092272-52094271 Eucalyptus grandis
Eucgr.B03166 5.0kb upstream 5.0kb upstream 13676 true Chr02: 52094272-52107947 Eucalyptus grandis
Eucgr.B03166 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52102948-52107947 Eucalyptus grandis
Eucgr.B03166 5.0kb downstream 5.0kb downstream 13676 true Chr02: 52089272-52102947 Eucalyptus grandis
Eucgr.B03166 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52089272-52094271 Eucalyptus grandis
Eucgr.B03166 10.0kb upstream 10.0kb upstream 18676 true Chr02: 52094272-52112947 Eucalyptus grandis
Eucgr.B03166 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52102948-52112947 Eucalyptus grandis
Eucgr.B03166 10.0kb downstream 10.0kb downstream 18676 true Chr02: 52084272-52102947 Eucalyptus grandis
Eucgr.B03166 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52084272-52094271 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.43753 0.0 10.8232    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.79028 0.0 8.76919    
cufflinks 0.191774 0.0 0.715294 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.4536 0.0 38.116    

0 Strain