Gene : Eucgr.B03162 E. grandis v2.0
Defline:  (1 of 5) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  2474
Name:  ? Eucgr.B03162 Secondary Identifier:  ? PAC:32059522
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03162 0.5kb upstream 0.5kb upstream 5044 true Chr02: 52054407-52059450 Eucalyptus grandis
Eucgr.B03162 0.5kb upstream 0.5kb upstream 500 false Chr02: 52058951-52059450 Eucalyptus grandis
Eucgr.B03162 0.5kb downstream 0.5kb downstream 5044 true Chr02: 52053907-52058950 Eucalyptus grandis
Eucgr.B03162 0.5kb downstream 0.5kb downstream 500 false Chr02: 52053907-52054406 Eucalyptus grandis
Eucgr.B03162 1.0kb upstream 1.0kb upstream 5544 true Chr02: 52054407-52059950 Eucalyptus grandis
Eucgr.B03162 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52058951-52059950 Eucalyptus grandis
Eucgr.B03162 1.0kb downstream 1.0kb downstream 5544 true Chr02: 52053407-52058950 Eucalyptus grandis
Eucgr.B03162 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52053407-52054406 Eucalyptus grandis
Eucgr.B03162 2.0kb upstream 2.0kb upstream 6544 true Chr02: 52054407-52060950 Eucalyptus grandis
Eucgr.B03162 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52058951-52060950 Eucalyptus grandis
Eucgr.B03162 2.0kb downstream 2.0kb downstream 6544 true Chr02: 52052407-52058950 Eucalyptus grandis
Eucgr.B03162 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52052407-52054406 Eucalyptus grandis
Eucgr.B03162 5.0kb upstream 5.0kb upstream 9544 true Chr02: 52054407-52063950 Eucalyptus grandis
Eucgr.B03162 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52058951-52063950 Eucalyptus grandis
Eucgr.B03162 5.0kb downstream 5.0kb downstream 9544 true Chr02: 52049407-52058950 Eucalyptus grandis
Eucgr.B03162 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52049407-52054406 Eucalyptus grandis
Eucgr.B03162 10.0kb upstream 10.0kb upstream 14544 true Chr02: 52054407-52068950 Eucalyptus grandis
Eucgr.B03162 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52058951-52068950 Eucalyptus grandis
Eucgr.B03162 10.0kb downstream 10.0kb downstream 14544 true Chr02: 52044407-52058950 Eucalyptus grandis
Eucgr.B03162 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52044407-52054406 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.03008 0.0 13.6798    
cufflinks 5.39732 0.0 12.3433    
cufflinks 7.07994 0.0 15.909    
cufflinks 15.0884 0.0 33.372    
cufflinks 24.1322 0.0 53.7818   High
cufflinks 4.73723 0.0 10.9162    

0 Strain