Gene : Eucgr.B03171 E. grandis v2.0
Defline:  (1 of 3) PTHR27003:SF5 - DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN Genomic Order:  2483
Name:  ? Eucgr.B03171 Secondary Identifier:  ? PAC:32058212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03171 0.5kb upstream 0.5kb upstream 1566 true Chr02: 52127043-52128608 Eucalyptus grandis
Eucgr.B03171 0.5kb upstream 0.5kb upstream 500 false Chr02: 52127043-52127542 Eucalyptus grandis
Eucgr.B03171 0.5kb downstream 0.5kb downstream 1566 true Chr02: 52127543-52129108 Eucalyptus grandis
Eucgr.B03171 0.5kb downstream 0.5kb downstream 500 false Chr02: 52128609-52129108 Eucalyptus grandis
Eucgr.B03171 1.0kb upstream 1.0kb upstream 2066 true Chr02: 52126543-52128608 Eucalyptus grandis
Eucgr.B03171 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52126543-52127542 Eucalyptus grandis
Eucgr.B03171 1.0kb downstream 1.0kb downstream 2066 true Chr02: 52127543-52129608 Eucalyptus grandis
Eucgr.B03171 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52128609-52129608 Eucalyptus grandis
Eucgr.B03171 2.0kb upstream 2.0kb upstream 3066 true Chr02: 52125543-52128608 Eucalyptus grandis
Eucgr.B03171 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52125543-52127542 Eucalyptus grandis
Eucgr.B03171 2.0kb downstream 2.0kb downstream 3066 true Chr02: 52127543-52130608 Eucalyptus grandis
Eucgr.B03171 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52128609-52130608 Eucalyptus grandis
Eucgr.B03171 5.0kb upstream 5.0kb upstream 6066 true Chr02: 52122543-52128608 Eucalyptus grandis
Eucgr.B03171 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52122543-52127542 Eucalyptus grandis
Eucgr.B03171 5.0kb downstream 5.0kb downstream 6066 true Chr02: 52127543-52133608 Eucalyptus grandis
Eucgr.B03171 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52128609-52133608 Eucalyptus grandis
Eucgr.B03171 10.0kb upstream 10.0kb upstream 11066 true Chr02: 52117543-52128608 Eucalyptus grandis
Eucgr.B03171 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52117543-52127542 Eucalyptus grandis
Eucgr.B03171 10.0kb downstream 10.0kb downstream 11066 true Chr02: 52127543-52138608 Eucalyptus grandis
Eucgr.B03171 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52128609-52138608 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050864 5270 Rosid View MSA
123619920 5271 Pentapetalae View MSA
122654349 5272 Eudicot View MSA
122042080 5273 Angiosperm View MSA
121348136 5274 Embryophyte View MSA
123380739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.61921 0.0 8.51493    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.562085 0.0 4.52683   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.51697 0.0 8.56456    

0 Strain