Gene : Eucgr.B03167 E. grandis v2.0
Defline:  (1 of 4) PTHR19305 - SYNAPTOSOMAL ASSOCIATED PROTEIN Genomic Order:  2479
Name:  ? Eucgr.B03167 Secondary Identifier:  ? PAC:32060427
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03167 0.5kb upstream 0.5kb upstream 3699 true Chr02: 52106986-52110684 Eucalyptus grandis
Eucgr.B03167 0.5kb upstream 0.5kb upstream 500 false Chr02: 52106986-52107485 Eucalyptus grandis
Eucgr.B03167 0.5kb downstream 0.5kb downstream 3699 true Chr02: 52107486-52111184 Eucalyptus grandis
Eucgr.B03167 0.5kb downstream 0.5kb downstream 500 false Chr02: 52110685-52111184 Eucalyptus grandis
Eucgr.B03167 1.0kb upstream 1.0kb upstream 4199 true Chr02: 52106486-52110684 Eucalyptus grandis
Eucgr.B03167 1.0kb upstream 1.0kb upstream 1000 false Chr02: 52106486-52107485 Eucalyptus grandis
Eucgr.B03167 1.0kb downstream 1.0kb downstream 4199 true Chr02: 52107486-52111684 Eucalyptus grandis
Eucgr.B03167 1.0kb downstream 1.0kb downstream 1000 false Chr02: 52110685-52111684 Eucalyptus grandis
Eucgr.B03167 2.0kb upstream 2.0kb upstream 5199 true Chr02: 52105486-52110684 Eucalyptus grandis
Eucgr.B03167 2.0kb upstream 2.0kb upstream 2000 false Chr02: 52105486-52107485 Eucalyptus grandis
Eucgr.B03167 2.0kb downstream 2.0kb downstream 5199 true Chr02: 52107486-52112684 Eucalyptus grandis
Eucgr.B03167 2.0kb downstream 2.0kb downstream 2000 false Chr02: 52110685-52112684 Eucalyptus grandis
Eucgr.B03167 5.0kb upstream 5.0kb upstream 8199 true Chr02: 52102486-52110684 Eucalyptus grandis
Eucgr.B03167 5.0kb upstream 5.0kb upstream 5000 false Chr02: 52102486-52107485 Eucalyptus grandis
Eucgr.B03167 5.0kb downstream 5.0kb downstream 8199 true Chr02: 52107486-52115684 Eucalyptus grandis
Eucgr.B03167 5.0kb downstream 5.0kb downstream 5000 false Chr02: 52110685-52115684 Eucalyptus grandis
Eucgr.B03167 10.0kb upstream 10.0kb upstream 13199 true Chr02: 52097486-52110684 Eucalyptus grandis
Eucgr.B03167 10.0kb upstream 10.0kb upstream 10000 false Chr02: 52097486-52107485 Eucalyptus grandis
Eucgr.B03167 10.0kb downstream 10.0kb downstream 13199 true Chr02: 52107486-52120684 Eucalyptus grandis
Eucgr.B03167 10.0kb downstream 10.0kb downstream 10000 false Chr02: 52110685-52120684 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069233 5270 Rosid View MSA
123745951 5271 Pentapetalae View MSA
122796965 5272 Eudicot View MSA
122050570 5273 Angiosperm View MSA
121349451 5274 Embryophyte View MSA
123428314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.0673 0.0 5.60902   High
cufflinks 0.447967 0.0 1.44221 Low Low
cufflinks 0.571486 0.0 1.78209    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.915433 0.0 2.70056    
cufflinks 1.87927 0.0 5.16364    

0 Strain