Gene : Eucgr.B03140 E. grandis v2.0
Defline:  (1 of 2) PF09011 - HMG-box domain (HMG_box_2) Genomic Order:  2452
Name:  ? Eucgr.B03140 Secondary Identifier:  ? PAC:32060369
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03140 0.5kb upstream 0.5kb upstream 4874 true Chr02: 51836047-51840920 Eucalyptus grandis
Eucgr.B03140 0.5kb upstream 0.5kb upstream 500 false Chr02: 51840421-51840920 Eucalyptus grandis
Eucgr.B03140 0.5kb downstream 0.5kb downstream 4874 true Chr02: 51835547-51840420 Eucalyptus grandis
Eucgr.B03140 0.5kb downstream 0.5kb downstream 500 false Chr02: 51835547-51836046 Eucalyptus grandis
Eucgr.B03140 1.0kb upstream 1.0kb upstream 5374 true Chr02: 51836047-51841420 Eucalyptus grandis
Eucgr.B03140 1.0kb upstream 1.0kb upstream 1000 false Chr02: 51840421-51841420 Eucalyptus grandis
Eucgr.B03140 1.0kb downstream 1.0kb downstream 5374 true Chr02: 51835047-51840420 Eucalyptus grandis
Eucgr.B03140 1.0kb downstream 1.0kb downstream 1000 false Chr02: 51835047-51836046 Eucalyptus grandis
Eucgr.B03140 2.0kb upstream 2.0kb upstream 6374 true Chr02: 51836047-51842420 Eucalyptus grandis
Eucgr.B03140 2.0kb upstream 2.0kb upstream 2000 false Chr02: 51840421-51842420 Eucalyptus grandis
Eucgr.B03140 2.0kb downstream 2.0kb downstream 6374 true Chr02: 51834047-51840420 Eucalyptus grandis
Eucgr.B03140 2.0kb downstream 2.0kb downstream 2000 false Chr02: 51834047-51836046 Eucalyptus grandis
Eucgr.B03140 5.0kb upstream 5.0kb upstream 9374 true Chr02: 51836047-51845420 Eucalyptus grandis
Eucgr.B03140 5.0kb upstream 5.0kb upstream 5000 false Chr02: 51840421-51845420 Eucalyptus grandis
Eucgr.B03140 5.0kb downstream 5.0kb downstream 9374 true Chr02: 51831047-51840420 Eucalyptus grandis
Eucgr.B03140 5.0kb downstream 5.0kb downstream 5000 false Chr02: 51831047-51836046 Eucalyptus grandis
Eucgr.B03140 10.0kb upstream 10.0kb upstream 14374 true Chr02: 51836047-51850420 Eucalyptus grandis
Eucgr.B03140 10.0kb upstream 10.0kb upstream 10000 false Chr02: 51840421-51850420 Eucalyptus grandis
Eucgr.B03140 10.0kb downstream 10.0kb downstream 14374 true Chr02: 51826047-51840420 Eucalyptus grandis
Eucgr.B03140 10.0kb downstream 10.0kb downstream 10000 false Chr02: 51826047-51836046 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064616 5270 Rosid View MSA
123751442 5271 Pentapetalae View MSA
122787834 5272 Eudicot View MSA
122046803 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain