Gene : Eucgr.B03113 E. grandis v2.0
Defline:  (1 of 1) PTHR12565:SF123 - TRANSCRIPTION FACTOR BIM2 Genomic Order:  2430
Name:  ? Eucgr.B03113 Secondary Identifier:  ? PAC:32059541
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03113 0.5kb upstream 0.5kb upstream 4933 true Chr02: 51422055-51426987 Eucalyptus grandis
Eucgr.B03113 0.5kb upstream 0.5kb upstream 500 false Chr02: 51422055-51422554 Eucalyptus grandis
Eucgr.B03113 0.5kb downstream 0.5kb downstream 4933 true Chr02: 51422555-51427487 Eucalyptus grandis
Eucgr.B03113 0.5kb downstream 0.5kb downstream 500 false Chr02: 51426988-51427487 Eucalyptus grandis
Eucgr.B03113 1.0kb upstream 1.0kb upstream 5433 true Chr02: 51421555-51426987 Eucalyptus grandis
Eucgr.B03113 1.0kb upstream 1.0kb upstream 1000 false Chr02: 51421555-51422554 Eucalyptus grandis
Eucgr.B03113 1.0kb downstream 1.0kb downstream 5433 true Chr02: 51422555-51427987 Eucalyptus grandis
Eucgr.B03113 1.0kb downstream 1.0kb downstream 1000 false Chr02: 51426988-51427987 Eucalyptus grandis
Eucgr.B03113 2.0kb upstream 2.0kb upstream 6433 true Chr02: 51420555-51426987 Eucalyptus grandis
Eucgr.B03113 2.0kb upstream 2.0kb upstream 2000 false Chr02: 51420555-51422554 Eucalyptus grandis
Eucgr.B03113 2.0kb downstream 2.0kb downstream 6433 true Chr02: 51422555-51428987 Eucalyptus grandis
Eucgr.B03113 2.0kb downstream 2.0kb downstream 2000 false Chr02: 51426988-51428987 Eucalyptus grandis
Eucgr.B03113 5.0kb upstream 5.0kb upstream 9433 true Chr02: 51417555-51426987 Eucalyptus grandis
Eucgr.B03113 5.0kb upstream 5.0kb upstream 5000 false Chr02: 51417555-51422554 Eucalyptus grandis
Eucgr.B03113 5.0kb downstream 5.0kb downstream 9433 true Chr02: 51422555-51431987 Eucalyptus grandis
Eucgr.B03113 5.0kb downstream 5.0kb downstream 5000 false Chr02: 51426988-51431987 Eucalyptus grandis
Eucgr.B03113 10.0kb upstream 10.0kb upstream 14433 true Chr02: 51412555-51426987 Eucalyptus grandis
Eucgr.B03113 10.0kb upstream 10.0kb upstream 10000 false Chr02: 51412555-51422554 Eucalyptus grandis
Eucgr.B03113 10.0kb downstream 10.0kb downstream 14433 true Chr02: 51422555-51436987 Eucalyptus grandis
Eucgr.B03113 10.0kb downstream 10.0kb downstream 10000 false Chr02: 51426988-51436987 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066475 5270 Rosid View MSA
123737331 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4325 0.0 31.2225    
cufflinks 24.688 0.0 65.8061   High
cufflinks 13.5174 0.0 38.1204    
cufflinks 22.0363 0.0 68.7144    
cufflinks 15.8632 0.0 40.6994    
cufflinks 7.22733 0.0 20.6214   Low

0 Strain