Gene : Eucgr.B03106 E. grandis v2.0
Defline:  (1 of 1) PTHR12565:SF121 - TRANSCRIPTION FACTOR BHLH49 Genomic Order:  2424
Name:  ? Eucgr.B03106 Secondary Identifier:  ? PAC:32060615
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03106 0.5kb upstream 0.5kb upstream 5222 true Chr02: 51327374-51332595 Eucalyptus grandis
Eucgr.B03106 0.5kb upstream 0.5kb upstream 500 false Chr02: 51327374-51327873 Eucalyptus grandis
Eucgr.B03106 0.5kb downstream 0.5kb downstream 5222 true Chr02: 51327874-51333095 Eucalyptus grandis
Eucgr.B03106 0.5kb downstream 0.5kb downstream 500 false Chr02: 51332596-51333095 Eucalyptus grandis
Eucgr.B03106 1.0kb upstream 1.0kb upstream 5722 true Chr02: 51326874-51332595 Eucalyptus grandis
Eucgr.B03106 1.0kb upstream 1.0kb upstream 1000 false Chr02: 51326874-51327873 Eucalyptus grandis
Eucgr.B03106 1.0kb downstream 1.0kb downstream 5722 true Chr02: 51327874-51333595 Eucalyptus grandis
Eucgr.B03106 1.0kb downstream 1.0kb downstream 1000 false Chr02: 51332596-51333595 Eucalyptus grandis
Eucgr.B03106 2.0kb upstream 2.0kb upstream 6722 true Chr02: 51325874-51332595 Eucalyptus grandis
Eucgr.B03106 2.0kb upstream 2.0kb upstream 2000 false Chr02: 51325874-51327873 Eucalyptus grandis
Eucgr.B03106 2.0kb downstream 2.0kb downstream 6722 true Chr02: 51327874-51334595 Eucalyptus grandis
Eucgr.B03106 2.0kb downstream 2.0kb downstream 2000 false Chr02: 51332596-51334595 Eucalyptus grandis
Eucgr.B03106 5.0kb upstream 5.0kb upstream 9722 true Chr02: 51322874-51332595 Eucalyptus grandis
Eucgr.B03106 5.0kb upstream 5.0kb upstream 5000 false Chr02: 51322874-51327873 Eucalyptus grandis
Eucgr.B03106 5.0kb downstream 5.0kb downstream 9722 true Chr02: 51327874-51337595 Eucalyptus grandis
Eucgr.B03106 5.0kb downstream 5.0kb downstream 5000 false Chr02: 51332596-51337595 Eucalyptus grandis
Eucgr.B03106 10.0kb upstream 10.0kb upstream 14722 true Chr02: 51317874-51332595 Eucalyptus grandis
Eucgr.B03106 10.0kb upstream 10.0kb upstream 10000 false Chr02: 51317874-51327873 Eucalyptus grandis
Eucgr.B03106 10.0kb downstream 10.0kb downstream 14722 true Chr02: 51327874-51342595 Eucalyptus grandis
Eucgr.B03106 10.0kb downstream 10.0kb downstream 10000 false Chr02: 51332596-51342595 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064699 5270 Rosid View MSA
123741271 5271 Pentapetalae View MSA
122787397 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.62914 0.0 19.338    
cufflinks 5.44878 0.0 12.4927    
cufflinks 9.43214 0.0 21.0448    
cufflinks 3.11922 0.0 7.48689   Low
cufflinks 6.22666 0.0 14.1499    
cufflinks 8.21539 0.0 18.4735    

0 Strain