Gene : Eucgr.B03780 E. grandis v2.0
Defline:  (1 of 5) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  3046
Name:  ? Eucgr.B03780 Secondary Identifier:  ? PAC:32061460
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03780 0.5kb upstream 0.5kb upstream 7262 true Chr02: 57257684-57264945 Eucalyptus grandis
Eucgr.B03780 0.5kb upstream 0.5kb upstream 500 false Chr02: 57264446-57264945 Eucalyptus grandis
Eucgr.B03780 0.5kb downstream 0.5kb downstream 7262 true Chr02: 57257184-57264445 Eucalyptus grandis
Eucgr.B03780 0.5kb downstream 0.5kb downstream 500 false Chr02: 57257184-57257683 Eucalyptus grandis
Eucgr.B03780 1.0kb upstream 1.0kb upstream 7762 true Chr02: 57257684-57265445 Eucalyptus grandis
Eucgr.B03780 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57264446-57265445 Eucalyptus grandis
Eucgr.B03780 1.0kb downstream 1.0kb downstream 7762 true Chr02: 57256684-57264445 Eucalyptus grandis
Eucgr.B03780 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57256684-57257683 Eucalyptus grandis
Eucgr.B03780 2.0kb upstream 2.0kb upstream 8762 true Chr02: 57257684-57266445 Eucalyptus grandis
Eucgr.B03780 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57264446-57266445 Eucalyptus grandis
Eucgr.B03780 2.0kb downstream 2.0kb downstream 8762 true Chr02: 57255684-57264445 Eucalyptus grandis
Eucgr.B03780 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57255684-57257683 Eucalyptus grandis
Eucgr.B03780 5.0kb upstream 5.0kb upstream 11762 true Chr02: 57257684-57269445 Eucalyptus grandis
Eucgr.B03780 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57264446-57269445 Eucalyptus grandis
Eucgr.B03780 5.0kb downstream 5.0kb downstream 11762 true Chr02: 57252684-57264445 Eucalyptus grandis
Eucgr.B03780 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57252684-57257683 Eucalyptus grandis
Eucgr.B03780 10.0kb upstream 10.0kb upstream 16762 true Chr02: 57257684-57274445 Eucalyptus grandis
Eucgr.B03780 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57264446-57274445 Eucalyptus grandis
Eucgr.B03780 10.0kb downstream 10.0kb downstream 16762 true Chr02: 57247684-57264445 Eucalyptus grandis
Eucgr.B03780 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57247684-57257683 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060995 5270 Rosid View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.8328 0.0 80.0708 High  
cufflinks 32.0752 0.0 75.7619    
cufflinks 29.4772 0.0 68.6818 High  
cufflinks 15.7649 0.0 35.3777   Low
cufflinks 42.9992 0.0 97.8976 High High
cufflinks 23.2968 0.0 53.2783    

0 Strain