Gene : Eucgr.B03782 E. grandis v2.0
Defline:  (1 of 2) PTHR31852:SF0 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  3048
Name:  ? Eucgr.B03782 Secondary Identifier:  ? PAC:32058480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03782 0.5kb upstream 0.5kb upstream 1546 true Chr02: 57294654-57296199 Eucalyptus grandis
Eucgr.B03782 0.5kb upstream 0.5kb upstream 500 false Chr02: 57294654-57295153 Eucalyptus grandis
Eucgr.B03782 0.5kb downstream 0.5kb downstream 1546 true Chr02: 57295154-57296699 Eucalyptus grandis
Eucgr.B03782 0.5kb downstream 0.5kb downstream 500 false Chr02: 57296200-57296699 Eucalyptus grandis
Eucgr.B03782 1.0kb upstream 1.0kb upstream 2046 true Chr02: 57294154-57296199 Eucalyptus grandis
Eucgr.B03782 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57294154-57295153 Eucalyptus grandis
Eucgr.B03782 1.0kb downstream 1.0kb downstream 2046 true Chr02: 57295154-57297199 Eucalyptus grandis
Eucgr.B03782 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57296200-57297199 Eucalyptus grandis
Eucgr.B03782 2.0kb upstream 2.0kb upstream 3046 true Chr02: 57293154-57296199 Eucalyptus grandis
Eucgr.B03782 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57293154-57295153 Eucalyptus grandis
Eucgr.B03782 2.0kb downstream 2.0kb downstream 3046 true Chr02: 57295154-57298199 Eucalyptus grandis
Eucgr.B03782 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57296200-57298199 Eucalyptus grandis
Eucgr.B03782 5.0kb upstream 5.0kb upstream 6046 true Chr02: 57290154-57296199 Eucalyptus grandis
Eucgr.B03782 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57290154-57295153 Eucalyptus grandis
Eucgr.B03782 5.0kb downstream 5.0kb downstream 6046 true Chr02: 57295154-57301199 Eucalyptus grandis
Eucgr.B03782 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57296200-57301199 Eucalyptus grandis
Eucgr.B03782 10.0kb upstream 10.0kb upstream 11046 true Chr02: 57285154-57296199 Eucalyptus grandis
Eucgr.B03782 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57285154-57295153 Eucalyptus grandis
Eucgr.B03782 10.0kb downstream 10.0kb downstream 11046 true Chr02: 57295154-57306199 Eucalyptus grandis
Eucgr.B03782 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57296200-57306199 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061418 5270 Rosid View MSA
123742078 5271 Pentapetalae View MSA
122788444 5272 Eudicot View MSA
122042676 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.8666 0.0 168.004 High  
cufflinks 593.293 0.0 1512.36 High  
cufflinks 134.702 0.0 301.825 High  
cufflinks 659.535 0.0 1692.3 High  
cufflinks 747.202 0.0 1970.41 High  
cufflinks 7.05364 0.0 17.7028   Low

0 Strain