Gene : Eucgr.B03752 E. grandis v2.0
Defline:  (1 of 2) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase Genomic Order:  3018
Name:  ? Eucgr.B03752 Secondary Identifier:  ? PAC:32062046
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LEU-DEG2-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03752 0.5kb upstream 0.5kb upstream 4647 true Chr02: 57081220-57085866 Eucalyptus grandis
Eucgr.B03752 0.5kb upstream 0.5kb upstream 500 false Chr02: 57081220-57081719 Eucalyptus grandis
Eucgr.B03752 0.5kb downstream 0.5kb downstream 4647 true Chr02: 57081720-57086366 Eucalyptus grandis
Eucgr.B03752 0.5kb downstream 0.5kb downstream 500 false Chr02: 57085867-57086366 Eucalyptus grandis
Eucgr.B03752 1.0kb upstream 1.0kb upstream 5147 true Chr02: 57080720-57085866 Eucalyptus grandis
Eucgr.B03752 1.0kb upstream 1.0kb upstream 1000 false Chr02: 57080720-57081719 Eucalyptus grandis
Eucgr.B03752 1.0kb downstream 1.0kb downstream 5147 true Chr02: 57081720-57086866 Eucalyptus grandis
Eucgr.B03752 1.0kb downstream 1.0kb downstream 1000 false Chr02: 57085867-57086866 Eucalyptus grandis
Eucgr.B03752 2.0kb upstream 2.0kb upstream 6147 true Chr02: 57079720-57085866 Eucalyptus grandis
Eucgr.B03752 2.0kb upstream 2.0kb upstream 2000 false Chr02: 57079720-57081719 Eucalyptus grandis
Eucgr.B03752 2.0kb downstream 2.0kb downstream 6147 true Chr02: 57081720-57087866 Eucalyptus grandis
Eucgr.B03752 2.0kb downstream 2.0kb downstream 2000 false Chr02: 57085867-57087866 Eucalyptus grandis
Eucgr.B03752 5.0kb upstream 5.0kb upstream 9147 true Chr02: 57076720-57085866 Eucalyptus grandis
Eucgr.B03752 5.0kb upstream 5.0kb upstream 5000 false Chr02: 57076720-57081719 Eucalyptus grandis
Eucgr.B03752 5.0kb downstream 5.0kb downstream 9147 true Chr02: 57081720-57090866 Eucalyptus grandis
Eucgr.B03752 5.0kb downstream 5.0kb downstream 5000 false Chr02: 57085867-57090866 Eucalyptus grandis
Eucgr.B03752 10.0kb upstream 10.0kb upstream 14147 true Chr02: 57071720-57085866 Eucalyptus grandis
Eucgr.B03752 10.0kb upstream 10.0kb upstream 10000 false Chr02: 57071720-57081719 Eucalyptus grandis
Eucgr.B03752 10.0kb downstream 10.0kb downstream 14147 true Chr02: 57081720-57095866 Eucalyptus grandis
Eucgr.B03752 10.0kb downstream 10.0kb downstream 10000 false Chr02: 57085867-57095866 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074648 5270 Rosid View MSA
123743387 5271 Pentapetalae View MSA
122790168 5272 Eudicot View MSA
122045409 5273 Angiosperm View MSA
121347999 5274 Embryophyte View MSA
123426187 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4709 0.0 43.7849    
cufflinks 21.7884 0.0 48.6223    
cufflinks 13.7506 0.0 31.5178    
cufflinks 26.0188 0.0 57.7684    
cufflinks 2.06875 0.0 5.67302   Low
cufflinks 6.68169 0.0 16.4603    

0 Strain