Gene : Eucgr.B03716 E. grandis v2.0
Defline:  (1 of 85) PF03514 - GRAS domain family (GRAS) Genomic Order:  2986
Name:  ? Eucgr.B03716 Secondary Identifier:  ? PAC:32061988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03716 0.5kb upstream 0.5kb upstream 2690 true Chr02: 56838604-56841293 Eucalyptus grandis
Eucgr.B03716 0.5kb upstream 0.5kb upstream 500 false Chr02: 56840794-56841293 Eucalyptus grandis
Eucgr.B03716 0.5kb downstream 0.5kb downstream 2690 true Chr02: 56838104-56840793 Eucalyptus grandis
Eucgr.B03716 0.5kb downstream 0.5kb downstream 500 false Chr02: 56838104-56838603 Eucalyptus grandis
Eucgr.B03716 1.0kb upstream 1.0kb upstream 3190 true Chr02: 56838604-56841793 Eucalyptus grandis
Eucgr.B03716 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56840794-56841793 Eucalyptus grandis
Eucgr.B03716 1.0kb downstream 1.0kb downstream 3190 true Chr02: 56837604-56840793 Eucalyptus grandis
Eucgr.B03716 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56837604-56838603 Eucalyptus grandis
Eucgr.B03716 2.0kb upstream 2.0kb upstream 4190 true Chr02: 56838604-56842793 Eucalyptus grandis
Eucgr.B03716 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56840794-56842793 Eucalyptus grandis
Eucgr.B03716 2.0kb downstream 2.0kb downstream 4190 true Chr02: 56836604-56840793 Eucalyptus grandis
Eucgr.B03716 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56836604-56838603 Eucalyptus grandis
Eucgr.B03716 5.0kb upstream 5.0kb upstream 7190 true Chr02: 56838604-56845793 Eucalyptus grandis
Eucgr.B03716 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56840794-56845793 Eucalyptus grandis
Eucgr.B03716 5.0kb downstream 5.0kb downstream 7190 true Chr02: 56833604-56840793 Eucalyptus grandis
Eucgr.B03716 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56833604-56838603 Eucalyptus grandis
Eucgr.B03716 10.0kb upstream 10.0kb upstream 12190 true Chr02: 56838604-56850793 Eucalyptus grandis
Eucgr.B03716 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56840794-56850793 Eucalyptus grandis
Eucgr.B03716 10.0kb downstream 10.0kb downstream 12190 true Chr02: 56828604-56840793 Eucalyptus grandis
Eucgr.B03716 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56828604-56838603 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071733 5270 Rosid View MSA
123743380 5271 Pentapetalae View MSA
122791329 5272 Eudicot View MSA
122043320 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.85881 0.0 9.74553   Low
cufflinks 10.6014 0.0 24.3065    
cufflinks 6.97919 0.0 16.6004    
cufflinks 4.76131 0.0 11.7358    
cufflinks 26.8945 0.0 59.523   High
cufflinks 11.6606 0.0 26.6523    

0 Strain