Gene : Eucgr.B03681 E. grandis v2.0
Defline:  (1 of 1) PTHR11933 - TRNA 5-METHYLAMINOMETHYL-2-THIOURIDYLATE -METHYLTRANSFERASE Genomic Order:  2957
Name:  ? Eucgr.B03681 Secondary Identifier:  ? PAC:32060785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03681 0.5kb upstream 0.5kb upstream 4783 true Chr02: 56590610-56595392 Eucalyptus grandis
Eucgr.B03681 0.5kb upstream 0.5kb upstream 500 false Chr02: 56594893-56595392 Eucalyptus grandis
Eucgr.B03681 0.5kb downstream 0.5kb downstream 4783 true Chr02: 56590110-56594892 Eucalyptus grandis
Eucgr.B03681 0.5kb downstream 0.5kb downstream 500 false Chr02: 56590110-56590609 Eucalyptus grandis
Eucgr.B03681 1.0kb upstream 1.0kb upstream 5283 true Chr02: 56590610-56595892 Eucalyptus grandis
Eucgr.B03681 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56594893-56595892 Eucalyptus grandis
Eucgr.B03681 1.0kb downstream 1.0kb downstream 5283 true Chr02: 56589610-56594892 Eucalyptus grandis
Eucgr.B03681 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56589610-56590609 Eucalyptus grandis
Eucgr.B03681 2.0kb upstream 2.0kb upstream 6283 true Chr02: 56590610-56596892 Eucalyptus grandis
Eucgr.B03681 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56594893-56596892 Eucalyptus grandis
Eucgr.B03681 2.0kb downstream 2.0kb downstream 6283 true Chr02: 56588610-56594892 Eucalyptus grandis
Eucgr.B03681 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56588610-56590609 Eucalyptus grandis
Eucgr.B03681 5.0kb upstream 5.0kb upstream 9283 true Chr02: 56590610-56599892 Eucalyptus grandis
Eucgr.B03681 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56594893-56599892 Eucalyptus grandis
Eucgr.B03681 5.0kb downstream 5.0kb downstream 9283 true Chr02: 56585610-56594892 Eucalyptus grandis
Eucgr.B03681 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56585610-56590609 Eucalyptus grandis
Eucgr.B03681 10.0kb upstream 10.0kb upstream 14283 true Chr02: 56590610-56604892 Eucalyptus grandis
Eucgr.B03681 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56594893-56604892 Eucalyptus grandis
Eucgr.B03681 10.0kb downstream 10.0kb downstream 14283 true Chr02: 56580610-56594892 Eucalyptus grandis
Eucgr.B03681 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56580610-56590609 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061540 5270 Rosid View MSA
123736557 5271 Pentapetalae View MSA
122792411 5272 Eudicot View MSA
122044530 5273 Angiosperm View MSA
121345192 5274 Embryophyte View MSA
123427133 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.66062 0.0 13.3747   High
cufflinks 1.9663 0.0 5.11912   Low
cufflinks 4.26976 0.0 10.3122    
cufflinks 2.79221 0.0 7.00063    
cufflinks 2.01075 0.0 5.24548   Low
cufflinks 5.69852 0.0 13.4968   High

0 Strain