Gene : Eucgr.B03669 E. grandis v2.0
Defline:  (1 of 125) PF00010 - Helix-loop-helix DNA-binding domain (HLH) Genomic Order:  2947
Name:  ? Eucgr.B03669 Secondary Identifier:  ? PAC:32061516
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03669 0.5kb upstream 0.5kb upstream 4332 true Chr02: 56422849-56427180 Eucalyptus grandis
Eucgr.B03669 0.5kb upstream 0.5kb upstream 500 false Chr02: 56426681-56427180 Eucalyptus grandis
Eucgr.B03669 0.5kb downstream 0.5kb downstream 4332 true Chr02: 56422349-56426680 Eucalyptus grandis
Eucgr.B03669 0.5kb downstream 0.5kb downstream 500 false Chr02: 56422349-56422848 Eucalyptus grandis
Eucgr.B03669 1.0kb upstream 1.0kb upstream 4832 true Chr02: 56422849-56427680 Eucalyptus grandis
Eucgr.B03669 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56426681-56427680 Eucalyptus grandis
Eucgr.B03669 1.0kb downstream 1.0kb downstream 4832 true Chr02: 56421849-56426680 Eucalyptus grandis
Eucgr.B03669 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56421849-56422848 Eucalyptus grandis
Eucgr.B03669 2.0kb upstream 2.0kb upstream 5832 true Chr02: 56422849-56428680 Eucalyptus grandis
Eucgr.B03669 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56426681-56428680 Eucalyptus grandis
Eucgr.B03669 2.0kb downstream 2.0kb downstream 5832 true Chr02: 56420849-56426680 Eucalyptus grandis
Eucgr.B03669 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56420849-56422848 Eucalyptus grandis
Eucgr.B03669 5.0kb upstream 5.0kb upstream 8832 true Chr02: 56422849-56431680 Eucalyptus grandis
Eucgr.B03669 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56426681-56431680 Eucalyptus grandis
Eucgr.B03669 5.0kb downstream 5.0kb downstream 8832 true Chr02: 56417849-56426680 Eucalyptus grandis
Eucgr.B03669 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56417849-56422848 Eucalyptus grandis
Eucgr.B03669 10.0kb upstream 10.0kb upstream 13832 true Chr02: 56422849-56436680 Eucalyptus grandis
Eucgr.B03669 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56426681-56436680 Eucalyptus grandis
Eucgr.B03669 10.0kb downstream 10.0kb downstream 13832 true Chr02: 56412849-56426680 Eucalyptus grandis
Eucgr.B03669 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56412849-56422848 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073794 5270 Rosid View MSA
123751595 5271 Pentapetalae View MSA
122793357 5272 Eudicot View MSA
122051356 5273 Angiosperm View MSA
121349754 5274 Embryophyte View MSA
123381429 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.90692 0.0 22.1726    
cufflinks 17.3249 0.0 38.3214   High
cufflinks 5.83209 0.0 13.4798    
cufflinks 4.22419 0.0 10.0336    
cufflinks 1.63676 0.0 4.26985   Low
cufflinks 12.2703 0.0 27.2749    

0 Strain