Gene : Eucgr.B03642 E. grandis v2.0
Defline:  (1 of 1) PTHR12687:SF4 - NUCLEOLAR COMPLEX PROTEIN 2 HOMOLOG Genomic Order:  2924
Name:  ? Eucgr.B03642 Secondary Identifier:  ? PAC:32061368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03642 0.5kb upstream 0.5kb upstream 6084 true Chr02: 56130160-56136243 Eucalyptus grandis
Eucgr.B03642 0.5kb upstream 0.5kb upstream 500 false Chr02: 56130160-56130659 Eucalyptus grandis
Eucgr.B03642 0.5kb downstream 0.5kb downstream 6084 true Chr02: 56130660-56136743 Eucalyptus grandis
Eucgr.B03642 0.5kb downstream 0.5kb downstream 500 false Chr02: 56136244-56136743 Eucalyptus grandis
Eucgr.B03642 1.0kb upstream 1.0kb upstream 6584 true Chr02: 56129660-56136243 Eucalyptus grandis
Eucgr.B03642 1.0kb upstream 1.0kb upstream 1000 false Chr02: 56129660-56130659 Eucalyptus grandis
Eucgr.B03642 1.0kb downstream 1.0kb downstream 6584 true Chr02: 56130660-56137243 Eucalyptus grandis
Eucgr.B03642 1.0kb downstream 1.0kb downstream 1000 false Chr02: 56136244-56137243 Eucalyptus grandis
Eucgr.B03642 2.0kb upstream 2.0kb upstream 7584 true Chr02: 56128660-56136243 Eucalyptus grandis
Eucgr.B03642 2.0kb upstream 2.0kb upstream 2000 false Chr02: 56128660-56130659 Eucalyptus grandis
Eucgr.B03642 2.0kb downstream 2.0kb downstream 7584 true Chr02: 56130660-56138243 Eucalyptus grandis
Eucgr.B03642 2.0kb downstream 2.0kb downstream 2000 false Chr02: 56136244-56138243 Eucalyptus grandis
Eucgr.B03642 5.0kb upstream 5.0kb upstream 10584 true Chr02: 56125660-56136243 Eucalyptus grandis
Eucgr.B03642 5.0kb upstream 5.0kb upstream 5000 false Chr02: 56125660-56130659 Eucalyptus grandis
Eucgr.B03642 5.0kb downstream 5.0kb downstream 10584 true Chr02: 56130660-56141243 Eucalyptus grandis
Eucgr.B03642 5.0kb downstream 5.0kb downstream 5000 false Chr02: 56136244-56141243 Eucalyptus grandis
Eucgr.B03642 10.0kb upstream 10.0kb upstream 15584 true Chr02: 56120660-56136243 Eucalyptus grandis
Eucgr.B03642 10.0kb upstream 10.0kb upstream 10000 false Chr02: 56120660-56130659 Eucalyptus grandis
Eucgr.B03642 10.0kb downstream 10.0kb downstream 15584 true Chr02: 56130660-56146243 Eucalyptus grandis
Eucgr.B03642 10.0kb downstream 10.0kb downstream 10000 false Chr02: 56136244-56146243 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068634 5270 Rosid View MSA
123737675 5271 Pentapetalae View MSA
122797934 5272 Eudicot View MSA
122046727 5273 Angiosperm View MSA
121344476 5274 Embryophyte View MSA
123425551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.86867 0.0 9.1453    
cufflinks 1.78898 0.0 4.54218   Low
cufflinks 3.93744 0.0 9.26286    
cufflinks 3.8179 0.0 8.97464    
cufflinks 2.63985 0.0 6.45504    
cufflinks 5.73926 0.0 13.1869   High

0 Strain