Gene : Eucgr.B03609 E. grandis v2.0
Defline:  (1 of 3) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  2892
Name:  ? Eucgr.B03609 Secondary Identifier:  ? PAC:32061947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03609 0.5kb upstream 0.5kb upstream 3108 true Chr02: 55844359-55847466 Eucalyptus grandis
Eucgr.B03609 0.5kb upstream 0.5kb upstream 500 false Chr02: 55846967-55847466 Eucalyptus grandis
Eucgr.B03609 0.5kb downstream 0.5kb downstream 3108 true Chr02: 55843859-55846966 Eucalyptus grandis
Eucgr.B03609 0.5kb downstream 0.5kb downstream 500 false Chr02: 55843859-55844358 Eucalyptus grandis
Eucgr.B03609 1.0kb upstream 1.0kb upstream 3608 true Chr02: 55844359-55847966 Eucalyptus grandis
Eucgr.B03609 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55846967-55847966 Eucalyptus grandis
Eucgr.B03609 1.0kb downstream 1.0kb downstream 3608 true Chr02: 55843359-55846966 Eucalyptus grandis
Eucgr.B03609 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55843359-55844358 Eucalyptus grandis
Eucgr.B03609 2.0kb upstream 2.0kb upstream 4608 true Chr02: 55844359-55848966 Eucalyptus grandis
Eucgr.B03609 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55846967-55848966 Eucalyptus grandis
Eucgr.B03609 2.0kb downstream 2.0kb downstream 4608 true Chr02: 55842359-55846966 Eucalyptus grandis
Eucgr.B03609 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55842359-55844358 Eucalyptus grandis
Eucgr.B03609 5.0kb upstream 5.0kb upstream 7608 true Chr02: 55844359-55851966 Eucalyptus grandis
Eucgr.B03609 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55846967-55851966 Eucalyptus grandis
Eucgr.B03609 5.0kb downstream 5.0kb downstream 7608 true Chr02: 55839359-55846966 Eucalyptus grandis
Eucgr.B03609 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55839359-55844358 Eucalyptus grandis
Eucgr.B03609 10.0kb upstream 10.0kb upstream 12608 true Chr02: 55844359-55856966 Eucalyptus grandis
Eucgr.B03609 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55846967-55856966 Eucalyptus grandis
Eucgr.B03609 10.0kb downstream 10.0kb downstream 12608 true Chr02: 55834359-55846966 Eucalyptus grandis
Eucgr.B03609 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55834359-55844358 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.489272 0.0 1.4818 Low  
cufflinks 1.44685 0.0 3.89157    
cufflinks 0.14197 0.0 0.504151 Low Low
cufflinks 1.07389 0.0 2.97627    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.755521 0.0 2.18781 Low  

0 Strain