Gene : Eucgr.B03587 E. grandis v2.0
Defline:  (1 of 1) PF07915//PF12999 - Glucosidase II beta subunit-like protein (PRKCSH) // Glucosidase II beta subunit-like (PRKCSH-like) Genomic Order:  2871
Name:  ? Eucgr.B03587 Secondary Identifier:  ? PAC:32059195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03587 0.5kb upstream 0.5kb upstream 7528 true Chr02: 55663488-55671015 Eucalyptus grandis
Eucgr.B03587 0.5kb upstream 0.5kb upstream 500 false Chr02: 55670516-55671015 Eucalyptus grandis
Eucgr.B03587 0.5kb downstream 0.5kb downstream 7528 true Chr02: 55662988-55670515 Eucalyptus grandis
Eucgr.B03587 0.5kb downstream 0.5kb downstream 500 false Chr02: 55662988-55663487 Eucalyptus grandis
Eucgr.B03587 1.0kb upstream 1.0kb upstream 8028 true Chr02: 55663488-55671515 Eucalyptus grandis
Eucgr.B03587 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55670516-55671515 Eucalyptus grandis
Eucgr.B03587 1.0kb downstream 1.0kb downstream 8028 true Chr02: 55662488-55670515 Eucalyptus grandis
Eucgr.B03587 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55662488-55663487 Eucalyptus grandis
Eucgr.B03587 2.0kb upstream 2.0kb upstream 9028 true Chr02: 55663488-55672515 Eucalyptus grandis
Eucgr.B03587 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55670516-55672515 Eucalyptus grandis
Eucgr.B03587 2.0kb downstream 2.0kb downstream 9028 true Chr02: 55661488-55670515 Eucalyptus grandis
Eucgr.B03587 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55661488-55663487 Eucalyptus grandis
Eucgr.B03587 5.0kb upstream 5.0kb upstream 12028 true Chr02: 55663488-55675515 Eucalyptus grandis
Eucgr.B03587 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55670516-55675515 Eucalyptus grandis
Eucgr.B03587 5.0kb downstream 5.0kb downstream 12028 true Chr02: 55658488-55670515 Eucalyptus grandis
Eucgr.B03587 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55658488-55663487 Eucalyptus grandis
Eucgr.B03587 10.0kb upstream 10.0kb upstream 17028 true Chr02: 55663488-55680515 Eucalyptus grandis
Eucgr.B03587 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55670516-55680515 Eucalyptus grandis
Eucgr.B03587 10.0kb downstream 10.0kb downstream 17028 true Chr02: 55653488-55670515 Eucalyptus grandis
Eucgr.B03587 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55653488-55663487 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026165 5273 Angiosperm View MSA
124060564 5270 Rosid View MSA
123753709 5271 Pentapetalae View MSA
122790613 5272 Eudicot View MSA
121346630 5274 Embryophyte View MSA
123428859 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.352 0.0 27.376    
cufflinks 13.1108 0.0 29.0206    
cufflinks 12.533 0.0 27.7507    
cufflinks 16.0649 0.0 35.5313    
cufflinks 7.18044 0.0 16.1995   Low
cufflinks 16.4447 0.0 36.3677    

0 Strain