Gene : Eucgr.B03577 E. grandis v2.0
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  2861
Name:  ? Eucgr.B03577 Secondary Identifier:  ? PAC:32058455
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6303 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03577 0.5kb upstream 0.5kb upstream 4844 true Chr02: 55599700-55604543 Eucalyptus grandis
Eucgr.B03577 0.5kb upstream 0.5kb upstream 500 false Chr02: 55604044-55604543 Eucalyptus grandis
Eucgr.B03577 0.5kb downstream 0.5kb downstream 4844 true Chr02: 55599200-55604043 Eucalyptus grandis
Eucgr.B03577 0.5kb downstream 0.5kb downstream 500 false Chr02: 55599200-55599699 Eucalyptus grandis
Eucgr.B03577 1.0kb upstream 1.0kb upstream 5344 true Chr02: 55599700-55605043 Eucalyptus grandis
Eucgr.B03577 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55604044-55605043 Eucalyptus grandis
Eucgr.B03577 1.0kb downstream 1.0kb downstream 5344 true Chr02: 55598700-55604043 Eucalyptus grandis
Eucgr.B03577 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55598700-55599699 Eucalyptus grandis
Eucgr.B03577 2.0kb upstream 2.0kb upstream 6344 true Chr02: 55599700-55606043 Eucalyptus grandis
Eucgr.B03577 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55604044-55606043 Eucalyptus grandis
Eucgr.B03577 2.0kb downstream 2.0kb downstream 6344 true Chr02: 55597700-55604043 Eucalyptus grandis
Eucgr.B03577 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55597700-55599699 Eucalyptus grandis
Eucgr.B03577 5.0kb upstream 5.0kb upstream 9344 true Chr02: 55599700-55609043 Eucalyptus grandis
Eucgr.B03577 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55604044-55609043 Eucalyptus grandis
Eucgr.B03577 5.0kb downstream 5.0kb downstream 9344 true Chr02: 55594700-55604043 Eucalyptus grandis
Eucgr.B03577 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55594700-55599699 Eucalyptus grandis
Eucgr.B03577 10.0kb upstream 10.0kb upstream 14344 true Chr02: 55599700-55614043 Eucalyptus grandis
Eucgr.B03577 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55604044-55614043 Eucalyptus grandis
Eucgr.B03577 10.0kb downstream 10.0kb downstream 14344 true Chr02: 55589700-55604043 Eucalyptus grandis
Eucgr.B03577 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55589700-55599699 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063161 5270 Rosid View MSA
123738140 5271 Pentapetalae View MSA
122789213 5272 Eudicot View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.72696 0.0 15.8942    
cufflinks 10.6711 0.0 24.2925    
cufflinks 7.49818 0.0 17.5429    
cufflinks 8.16104 0.0 18.9307    
cufflinks 7.9544 0.0 18.5316    
cufflinks 17.141 0.0 38.1883   High

0 Strain