Gene : Eucgr.B03543 E. grandis v2.0
Defline:  (1 of 2) PTHR31717:SF3 - ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED Genomic Order:  2828
Name:  ? Eucgr.B03543 Secondary Identifier:  ? PAC:32059893
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03543 0.5kb upstream 0.5kb upstream 4388 true Chr02: 55332449-55336836 Eucalyptus grandis
Eucgr.B03543 0.5kb upstream 0.5kb upstream 500 false Chr02: 55336337-55336836 Eucalyptus grandis
Eucgr.B03543 0.5kb downstream 0.5kb downstream 4388 true Chr02: 55331949-55336336 Eucalyptus grandis
Eucgr.B03543 0.5kb downstream 0.5kb downstream 500 false Chr02: 55331949-55332448 Eucalyptus grandis
Eucgr.B03543 1.0kb upstream 1.0kb upstream 4888 true Chr02: 55332449-55337336 Eucalyptus grandis
Eucgr.B03543 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55336337-55337336 Eucalyptus grandis
Eucgr.B03543 1.0kb downstream 1.0kb downstream 4888 true Chr02: 55331449-55336336 Eucalyptus grandis
Eucgr.B03543 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55331449-55332448 Eucalyptus grandis
Eucgr.B03543 2.0kb upstream 2.0kb upstream 5888 true Chr02: 55332449-55338336 Eucalyptus grandis
Eucgr.B03543 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55336337-55338336 Eucalyptus grandis
Eucgr.B03543 2.0kb downstream 2.0kb downstream 5888 true Chr02: 55330449-55336336 Eucalyptus grandis
Eucgr.B03543 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55330449-55332448 Eucalyptus grandis
Eucgr.B03543 5.0kb upstream 5.0kb upstream 8888 true Chr02: 55332449-55341336 Eucalyptus grandis
Eucgr.B03543 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55336337-55341336 Eucalyptus grandis
Eucgr.B03543 5.0kb downstream 5.0kb downstream 8888 true Chr02: 55327449-55336336 Eucalyptus grandis
Eucgr.B03543 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55327449-55332448 Eucalyptus grandis
Eucgr.B03543 10.0kb upstream 10.0kb upstream 13888 true Chr02: 55332449-55346336 Eucalyptus grandis
Eucgr.B03543 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55336337-55346336 Eucalyptus grandis
Eucgr.B03543 10.0kb downstream 10.0kb downstream 13888 true Chr02: 55322449-55336336 Eucalyptus grandis
Eucgr.B03543 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55322449-55332448 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074150 5270 Rosid View MSA
123747979 5271 Pentapetalae View MSA
122795064 5272 Eudicot View MSA
122050487 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.6443 0.0 65.1027 High High
cufflinks 9.02467 0.0 20.7523    
cufflinks 25.1694 0.0 62.9962   High
cufflinks 5.58051 0.0 13.3238    
cufflinks 4.41972 0.0 11.0279   Low
cufflinks 9.82891 0.0 23.2093    

0 Strain