Gene : Eucgr.B03530 E. grandis v2.0
Defline:  (1 of 1) PTHR21240 - 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE Genomic Order:  2816
Name:  ? Eucgr.B03530 Secondary Identifier:  ? PAC:32060264
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.B03530 0.5kb upstream 0.5kb upstream 4395 true Chr02: 55207430-55211824 Eucalyptus grandis
Eucgr.B03530 0.5kb upstream 0.5kb upstream 500 false Chr02: 55207430-55207929 Eucalyptus grandis
Eucgr.B03530 0.5kb downstream 0.5kb downstream 4395 true Chr02: 55207930-55212324 Eucalyptus grandis
Eucgr.B03530 0.5kb downstream 0.5kb downstream 500 false Chr02: 55211825-55212324 Eucalyptus grandis
Eucgr.B03530 1.0kb upstream 1.0kb upstream 4895 true Chr02: 55206930-55211824 Eucalyptus grandis
Eucgr.B03530 1.0kb upstream 1.0kb upstream 1000 false Chr02: 55206930-55207929 Eucalyptus grandis
Eucgr.B03530 1.0kb downstream 1.0kb downstream 4895 true Chr02: 55207930-55212824 Eucalyptus grandis
Eucgr.B03530 1.0kb downstream 1.0kb downstream 1000 false Chr02: 55211825-55212824 Eucalyptus grandis
Eucgr.B03530 2.0kb upstream 2.0kb upstream 5895 true Chr02: 55205930-55211824 Eucalyptus grandis
Eucgr.B03530 2.0kb upstream 2.0kb upstream 2000 false Chr02: 55205930-55207929 Eucalyptus grandis
Eucgr.B03530 2.0kb downstream 2.0kb downstream 5895 true Chr02: 55207930-55213824 Eucalyptus grandis
Eucgr.B03530 2.0kb downstream 2.0kb downstream 2000 false Chr02: 55211825-55213824 Eucalyptus grandis
Eucgr.B03530 5.0kb upstream 5.0kb upstream 8895 true Chr02: 55202930-55211824 Eucalyptus grandis
Eucgr.B03530 5.0kb upstream 5.0kb upstream 5000 false Chr02: 55202930-55207929 Eucalyptus grandis
Eucgr.B03530 5.0kb downstream 5.0kb downstream 8895 true Chr02: 55207930-55216824 Eucalyptus grandis
Eucgr.B03530 5.0kb downstream 5.0kb downstream 5000 false Chr02: 55211825-55216824 Eucalyptus grandis
Eucgr.B03530 10.0kb upstream 10.0kb upstream 13895 true Chr02: 55197930-55211824 Eucalyptus grandis
Eucgr.B03530 10.0kb upstream 10.0kb upstream 10000 false Chr02: 55197930-55207929 Eucalyptus grandis
Eucgr.B03530 10.0kb downstream 10.0kb downstream 13895 true Chr02: 55207930-55221824 Eucalyptus grandis
Eucgr.B03530 10.0kb downstream 10.0kb downstream 10000 false Chr02: 55211825-55221824 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041304 5273 Angiosperm View MSA
124062191 5270 Rosid View MSA
123739774 5271 Pentapetalae View MSA
122787272 5272 Eudicot View MSA
121344175 5274 Embryophyte View MSA
123425366 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8063 0.0 34.3092    
cufflinks 8.87209 0.0 21.265   Low
cufflinks 11.6562 0.0 33.9696    
cufflinks 10.5721 0.0 31.4379    
cufflinks 17.2428 0.0 45.0521    
cufflinks 22.6069 0.0 57.4139   High

0 Strain